Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq213618 100 9e-16 seq211385 100 9e-16 seq201504 100 9e-16 seq101120 100 9e-16 seq12314 100 9e-16 seq247670 95.1 4e-14 >seq213618 Length=17143 Score = 100 bits (110), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||| | |||||||| | || ||||| || || ||| || || ||||||||||| Sbjct 1 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTT-GCATCTATCTTCTGGTT 59 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| ||||| || | |||| || || ||| ||||| || |||||||||| ||||| Sbjct 60 GAAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGA 119 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| |||| || ||||| || ||||| Sbjct 120 GGGGATGCACTGTGACTTTGCTTGTCT 146 >seq211385 Length=3642 Score = 100 bits (110), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||| | |||||||| | || ||||| || || ||| || || ||||||||||| Sbjct 2246 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTT-GCATCTATCTTCTGGTT 2304 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| ||||| || | |||| || || ||| ||||| || |||||||||| ||||| Sbjct 2305 GAAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGA 2364 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| |||| || ||||| || ||||| Sbjct 2365 GGGGATGCACTGTGACTTTGCTTGTCT 2391 >seq201504 Length=1836 Score = 100 bits (110), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 ||||||||||||| |||||| ||| | || || || ||||| ||| || || || ||||| Sbjct 780 GTCGCTTTTGCTGCGGTCGAGGGAATCTTCTTCAGTGGCAGTTTT-GCATCTATATTCTG 838 Query 443775 GTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGA 443834 | ||||| | || | |||| || ||| | ||||||||| | |||||||| || Sbjct 839 GCTGAAACAAGAAGGTTTAATGCCTGGACTGTGTTCTAGTAACGAGTTTATCAGTCGAGA 898 Query 443835 CGAGGGTTTGCATTGCGACTTCGCCTG 443861 |||||||||||| || ||||| || || Sbjct 899 CGAGGGTTTGCACTGTGACTTTGCATG 925 >seq101120 Length=1587 Score = 100 bits (110), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||| | |||||||| | || ||||| || || ||| || || ||||||||||| Sbjct 1587 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTT-GCATCTATCTTCTGGTT 1529 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| ||||| || | |||| || || ||| ||||| || |||||||||| ||||| Sbjct 1528 GAAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGA 1469 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| |||| || ||||| || ||||| Sbjct 1468 GGGGATGCACTGTGACTTTGCTTGTCT 1442 >seq12314 Length=2576 Score = 100 bits (110), Expect = 9e-16 Identities = 111/147 (76%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 443718 GCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTGGTT 443777 || ||||| | |||||||| | || ||||| || || ||| || || ||||||||||| Sbjct 1397 GCGTTTGCGGCTGTCGAAGGGATCTTTTTTAGTGGTAGTTTT-GCATCTATCTTCTGGTT 1339 Query 443778 GAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGGACGA 443837 ||| ||||| || | |||| || || ||| ||||| || |||||||||| ||||| Sbjct 1338 GAAGAAGCGCGGTGTAATGCCTGGATTGTGCTTCAGTAATGAGTTGATCAGTCGAGACGA 1279 Query 443838 GGGTTTGCATTGCGACTTCGCCTGTCT 443864 ||| |||| || ||||| || ||||| Sbjct 1278 GGGGATGCACTGTGACTTTGCTTGTCT 1252 >seq247670 Length=3146 Score = 95.1 bits (104), Expect = 4e-14 Identities = 112/148 (76%), Gaps = 3/148 (2%) Strand=Plus/Minus Query 443715 GTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTTCTG 443774 ||||||||||||| |||||| ||| | || || || ||||| ||| || || || ||||| Sbjct 738 GTCGCTTTTGCTGCGGTCGAGGGAATCTTCTTCAGTGGCAGTTTT-GCATCTATATTCTG 680 Query 443775 GTTGAAAAAGCGTGGACTTA-TGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCGGG 443833 | ||||| | | || ||| ||| || ||| | ||||||||| | |||||||| | Sbjct 679 GCTGAAACAA-GAAGATTTAATGCCTGGACTGTGTTCTAGTAACGAGTTTATCAGTCGAG 621 Query 443834 ACGAGGGTTTGCATTGCGACTTCGCCTG 443861 ||||||||||||| || || || || || Sbjct 620 ACGAGGGTTTGCACTGTGATTTTGCGTG 593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1583141439434030