Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq175777 120 3e-22 seq153922 100 3e-16 seq189173 98.7 1e-15 seq248745 89.7 6e-13 >seq175777 Length=2924 Score = 120 bits (132), Expect = 3e-22 Identities = 296/445 (67%), Gaps = 12/445 (3%) Strand=Plus/Minus Query 79127 ACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACA 79186 ||||||||||||| | || || |||||| ||| |||| || |||||||||||| || Sbjct 2916 ACTTGATGGTGCCCAGGTGCTGGTGGTTGGATTTCGCGTTGCACGCGTCCTTGTAGAGCA 2857 Query 79187 TGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCC 79246 |||||||| || ||||| | ||| | ||||| | ||||| | || || Sbjct 2856 TGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGAATCGATTGCCAGAGGCGCCTCGCTG 2797 Query 79247 GGACAACCTTCTTGTACCGA--CCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAGC 79304 | || | | || | || |||| | ||||| || ||||||| ||| Sbjct 2796 G--CATCTTGCTCGAGCCCTTGCCCTCTTGCTCGTACTTCTCATACAACTGCCGGAATTG 2739 Query 79305 CTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTC 79364 ||| || || || | | || || |||| ||| ||| |||||| ||| || | Sbjct 2738 CTCGCCCCAGCAGTCCGATAACCCGGGACACTTGTGAGGGTCCATCAGCGTCCACTCGCC 2679 Query 79365 GTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCG 79424 | ||||| || ||||||||| || ||||||||||||||||| ||||| | |||||| Sbjct 2678 ATTTTTCTCCACTCGCTCCATGAACAGATCCGGGATCCACAGGGCGGTGAATATGTCGCG 2619 Query 79425 -GCAACGCATCTCC---TCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGT 79480 || | ||| | || || || || ||| |||||||| || || |||| Sbjct 2618 CGC----CTTCTTCGATTCATCCCCGTGATTCCTCTTGAGCTCGAGGAACTCGCCAATGT 2563 Query 79481 CGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGT 79540 | | |||||||||||| | || ||||| || | || |||||| ||| ||||||| Sbjct 2562 CCGGGTGCCACGGCTCGATGTACATGGCAAAAGCGCCGGGTCGCTTGTTGCCTCCCTGGT 2503 Query 79541 TGACGTACCGGGCCGTGTTGTTGAA 79565 ||||||||| || | || ||||| Sbjct 2502 CGACGTACCGCGCGGCGTAATTGAA 2478 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 79654 CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCC 79713 |||||||| |||| | ||||||||| | |||| || || || || ||| | || || Sbjct 2389 CCGATGCCGCCGGCGTATTTGGAGATGAGACCGCAGTCTTTCAGAGTATCGAATATTCCT 2330 Query 79714 TCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTA 79773 ||||| ||||| |||| || | | ||||||||||||||| | || | | | || Sbjct 2329 TCGATGCAGTCGCCCTTGATGGTCAGCAGGAAGCAGCTCGAGAGTTGAGCGAATCTTGTG 2270 Query 79774 CCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTAC 79833 || |||||||| || ||||| | ||||| |||| |||| | |||||||| ||| Sbjct 2269 CCAGCGTTGAACAGTGTCGGAGAGGCGTGGATGAACCACTTCTCCGACATCAGATTGTAT 2210 Query 79834 GTCT 79837 |||| Sbjct 2209 GTCT 2206 >seq153922 Length=2492 Score = 100 bits (110), Expect = 3e-16 Identities = 519/812 (64%), Gaps = 41/812 (5%) Strand=Plus/Plus Query 79045 GGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG---GCTAGAAACCTCG 79101 ||||| | | ||| ||||| || || ||||| ||||||| || ||| | |||| Sbjct 868 GGTAGAGAAATCGAGGCCAGATTACAAACGGCGATCTCGTCAGGTGCGCTGTA---CTCG 924 Query 79102 ATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTC 79161 | ||| || ||||||| ||| ||||||||||||| | || || || ||| ||| Sbjct 925 ACGATCTCCGTGCACAGATTGCTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGATTTC 984 Query 79162 TCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGA 79221 |||| || | |||||||||| |||||||||| || ||||| | ||| | |||| Sbjct 985 GCGTTGCACGAGTCCTTGTAGAGCATGTACGGCACTCCCGTCTCGATCTGCGAGTCGAGA 1044 Query 79222 ACGCCGTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACC---GACCCTGTGCGACG 79278 | | ||| | | | | | |||| | | |||| || | | ||| || Sbjct 1045 ATCGATTGCCAAAGGCGTCTAG--CAGACATCTTGCTTGAGCCCTTGTCTTCTTGC-TCG 1101 Query 79279 TACGTCCGGTACAACTCGTTGAAAGCCT--CCCCATAGACA-TCGGGCAGGCCCGGGCAC 79335 || || |||||||| || ||| ||||| ||| || | | || || ||| Sbjct 1102 TATTTCTCATACAACTCCCGAAATTCCTTGCCCCA---ACAGTCCGATAACCCGGGACAC 1158 Query 79336 TCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCC 79395 |||| ||| |||||| |||||| | | ||||| || ||||||||| || ||| Sbjct 1159 TCGTTAGGGTCCATCAGCGTCCAGTCACCATTTTTCTCGACTCGCTCCATGAACAGATCC 1218 Query 79396 GGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGC----ATCTCCTCGTCGCCCTGGTT 79451 || ||||| | || ||||| | ||| || ||| || || || || || || Sbjct 1219 GGAATCCATAAAGCAGTGAATATGTCCCG----CGCCTTTTTCGATTCATCCCCATGATT 1274 Query 79452 CAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAA 79511 || |||||||| || ||||| | ||||||||| || | ||||| || | Sbjct 1275 TTTTTTGAGTTCGAGAAACTCGCCAATGTCCGGGTGCCACGGTTCGATGTAGATTGCAAT 1334 Query 79512 CGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTG--TTG-TTGAAAAC 79568 |||||| ||| | ||| || ||| | |||| || | || ||| ||||| || Sbjct 1335 CGAACCAGGACGC---CTGCCTCCTTGGCTTACGTGTCG---CATGACTTGATTGAATAC 1388 Query 79569 TCGGAGCATGGGCACGATGCCGTCGGCGACG--CCGTTCGTCCCGTTGATTCGTGTACCG 79626 ||| ||| || | || | ||| | ||||||| | ||||| | || Sbjct 1389 CTGGATCATTGGGGTCAGACCTT--TCGATGTATTGTTCGTCTTGGTGATTGAAGAGCCA 1446 Query 79627 CTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCCCCGGACCACTTGGAGATGTGCGC 79685 ||| ||||||| | | | | | || ||||| || |||| | ||||||||| Sbjct 1447 TTCGACCGAATGCT-GTGTACATTGAGACCGATTCCACCGGCATATTTGGAGATGATACT 1505 Query 79686 GCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAA 79745 || ||| | | ||| ||||| || || ||||| ||| || || || | | || ||| Sbjct 1506 ACAGTCCCTAACCGTATCGTATATTCCTTCGATACTGTCATCTTTGATTGTCAGCAAGAA 1565 Query 79746 GCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGT 79805 |||||||| | || || | || || |||||||| || ||||| | |||||| | Sbjct 1566 ACAGCTCGAGAGTTGAGGTAATCTTGTGCCAGCGTTGAACAGTGTCGGAGACGCGTGAAT 1625 Query 79806 GAAGAACTTTTGGCTCATCAGATCGTACGTCT 79837 ||| | || | |||||||| |||||||| Sbjct 1626 GAACCATTTCTCTGACATCAGATTGTACGTCT 1657 >seq189173 Length=1595 Score = 98.7 bits (108), Expect = 1e-15 Identities = 165/239 (69%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 79599 GCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGAT 79658 ||||||||||||| ||| | || || ||| |||||| | | | || ||||| Sbjct 12 GCCGTTCGTCCCGGCGATCGGCGTCCCAGTCGACCGAATACTGTGGATATTGAGCCCGAT 71 Query 79659 GCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGAT 79718 ||| |||| | ||||||||| | |||| || || || || ||| | ||||| ||||| Sbjct 72 GCCGCCGGCGTATTTGGAGATGAGACCGCAGTCTTTCAGAGTATCGAAAATGCCTTCGAT 131 Query 79719 CGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGC 79778 ||||| |||| || | | ||||||||||||||| | || | | | || || | Sbjct 132 GCAGTCGCCCTTGATTGTCAGCAGGAAGCAGCTCGAGAGTTGAGCGAATCTTGTGCCCGA 191 Query 79779 GTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCT 79837 || ||| || ||||| | ||||| |||| |||| | |||||||| ||| |||| Sbjct 192 GTCGAACAGTGTCGGAGAGGCGTGGATGAACCACTTCTCCGACATCAGATTGTATGTCT 250 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226 |||||||| | |||||| |||||| |||| ||||| | ||||| || ||| || Sbjct 250 AGACATACAATCTGATGTCGGAGAAGTGGTTCATCCACGCCTCTCCGACACTGTTCGACT 191 Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286 | || || | | | || | |||||||| ||||| || | || |||| ||| ||| Sbjct 190 CGGGCACAAGATTCGCTCAACTCTCGAGCTGCTTCCTGCTGACAATCAAGGGCGACTGCA 131 Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346 | || ||||| | ||| || || || || |||| | ||||||||| | |||| || | Sbjct 130 TCGAAGGCATTTTCGATACTCTGAAAGACTGCGGTCTCATCTCCAAATACGCCGGCGGCA 71 Query 19347 TCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGG 19404 ||||| || | | | ||| ||||||| ||| || | ||| ||||||||||| Sbjct 70 TCGGGCTCAATATCCACAGTATTCGGTCGACTGGGACGCCGATCGCCGGGACGAACGG 13 >seq248745 Length=1199 Score = 89.7 bits (98), Expect = 6e-13 Identities = 163/239 (68%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 79599 GCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGAT 79658 ||||||||||||| ||| | || || ||| |||||| | | | || ||||| Sbjct 22 GCCGTTCGTCCCGGCGATCGGCGTCCCAGTCGACCGAATACTGTGGATATTGAGCCCGAT 81 Query 79659 GCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGAT 79718 ||| |||| | ||||||||| | |||| || || | || ||| | ||| | ||||| Sbjct 82 GCCGCCGGCGTATTTGGAGATGAGACCGCAGTCTTTCAAAGTATCGAAAATGTCTTCGAT 141 Query 79719 CGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGC 79778 ||||| |||| || | | ||||||||||||||| | | | | | || || | Sbjct 142 GCAGTCGCCCTTGATGGTCAGCAGGAAGCAGCTCGAGAGTTTAGCGAATCTTGTGCCAGA 201 Query 79779 GTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCT 79837 |||||| || ||||| | ||||| |||| |||| | |||||||| ||| |||| Sbjct 202 GTTGAACAGTGTCGGAGAGGCGTGGATGAACCACTTCTCCTACATCAGATTGTATGTCT 260 Score = 87.8 bits (96), Expect = 2e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 19167 AGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTTCAACG 19226 |||||||| | |||||| |||||| |||| ||||| | ||||| || |||||| Sbjct 260 AGACATACAATCTGATGTAGGAGAAGTGGTTCATCCACGCCTCTCCGACACTGTTCAACT 201 Query 19227 CCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGACAGCA 19286 | || || | | | | | |||||||| ||||| || | || |||| ||| ||| Sbjct 200 CTGGCACAAGATTCGCTAAACTCTCGAGCTGCTTCCTGCTGACCATCAAGGGCGACTGCA 141 Query 19287 TTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTA 19346 | || | ||| | ||| || | || || |||| | ||||||||| | |||| || | Sbjct 140 TCGAAGACATTTTCGATACTTTGAAAGACTGCGGTCTCATCTCCAAATACGCCGGCGGCA 81 Query 19347 TCGGGATCCACTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGAACGG 19404 ||||| || | | | ||| ||||||| ||| || | ||| ||||||||||| Sbjct 80 TCGGGCTCAATATCCACAGTATTCGGTCGACTGGGACGCCGATCGCCGGGACGAACGG 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546774635633760