Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq230650 125 6e-24 >seq230650 Length=142828 Score = 125 bits (138), Expect = 6e-24 Identities = 212/303 (70%), Gaps = 8/303 (3%) Strand=Plus/Plus Query 29606 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCA 29665 ||| ||||||| ||||| ||||| |||| | ||| || || | |||||||||| Sbjct 94602 AGTCTGGGAAACGGTCTCGGCTCTCTCTTCATCTGCGTCGACAAAGCGTCCACGTGGTTC 94661 Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725 | ||||||||| || || || || | ||| | | | | || |||| | || |||||| Sbjct 94662 AAGTAGACGTGCGCGTCCCCGAGCGAGTGAATCAGCGCCCCGGGTTTGTGTCCCGTGACG 94721 Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || | |||| || || | | || |||||||| || || ||||||||||||||| Sbjct 94722 TGGGCAACCATGCGGGTCAGTATCGCATAACTGGCGATATTGAACGGCACCCCGAGCCCC 94781 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTC-TCCGTCGCTC-----ACGTAA 29839 ||||| | ||||||||||| | || |||||| | || || | || | || | Sbjct 94782 ATGTCAGCGGACCTCTGGTACAACTTGCACGACAAATCGTCGGAGGCGCGGTCGACATGG 94841 Query 29840 AACTGACACATGGCA-TGGCACGGAGGAAGGGCCATGAGACCCAAGTCTTTGGGGTTCCA 29898 ||||| || | || ||||||||||| || |||||||| || || |||||||| Sbjct 94842 AACTG-CATCAGACAGTGGCACGGAGGCAGCGCCATGAGCGGCACATCGCGCGGGTTCCA 94900 Query 29899 GGC 29901 ||| Sbjct 94901 GGC 94903 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 29606 AGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCA 29665 ||| | ||||| ||||| ||||| |||| | ||| || | | |||||||||| Sbjct 56071 AGTCTTGGAAACGGTCTCGGCTCTCTCTTCATCTGCGTCGATAAAGCGTCCACGTGGTTT 56012 Query 29666 AGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACG 29725 || |||||||| || ||||| || ||| | | | | | |||| | || |||||| Sbjct 56011 AG-TAGACGTGCGCGTCTCCGAGAGTGA--ATCAGCGCCACGGGTTTGTGTCCCGTGACG 55955 Query 29726 TGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCC 29785 || || | |||| || || | | ||| |||||||| ||||| || |||| ||||||| Sbjct 55954 TGGGCGACCATGCGGGTCAGTATCGCGTAACTGGCGATATTAAACGGTACCCTGAGCCCC 55895 Query 29786 ATGTCCCCTGACCTCTGGTAGAGCTGGCACG 29816 || | | ||||||||||| | || | ||| Sbjct 55894 ATATAAGCGGACCTCTGGTACAACTTGTACG 55864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404899663601044