Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Girardia_20tigrina_20[genbank_20GCA_5F001938485.1_202017-01-06] 255,254 sequences; 1,428,149,015 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq211385 129 6e-25 seq12314 127 2e-24 seq247670 107 2e-18 seq201504 107 2e-18 seq243336 104 2e-17 >seq211385 Length=3642 Score = 129 bits (142), Expect = 6e-25 Identities = 193/270 (71%), Gaps = 8/270 (3%) Strand=Plus/Minus Query 23761 TTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATA 23820 |||| || ||||| ||||| | |||||| | | ||||||||| ||||||||| Sbjct 2085 TTTTGCTCCTTATCCTCAATATAAGAATCAATCAACAGTGAATACATTTCTGAATGAATA 2026 Query 23821 TTTTCAATAGCAATCTGAAACCCATAAAAA-CATCTAGCTTCAGACAATTGAACATCATT 23879 ||||| || || || || || | |||||| | ||| ||||| | || || || || || Sbjct 2025 TTTTCCATTGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACTTCTTT 1967 Query 23880 AAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAG 23939 | |||||||| || |||||||| ||||| || |||||||| || || || || ||||| Sbjct 1966 CAGAAATCTTTCTGCCAAATTTTCATTAACTATTCCATCACTGGCTGCGAAAAAGGCAAG 1907 Query 23940 AACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTT 23999 |||| || |||||| ||| || | | ||| | |||| ||| ||||||| Sbjct 1906 GACATGCGAAATGAAATGTTGTTCTTCCGGTTTTAAGTCGTTCC-ATC-----TATCTTT 1853 Query 24000 TGATAAATCAACTTCATCAACTGTCCAAAA 24029 || |||| | ||| |||||||||||||| Sbjct 1852 CGACAAATTTATTTCTTCAACTGTCCAAAA 1823 >seq12314 Length=2576 Score = 127 bits (140), Expect = 2e-24 Identities = 168/229 (73%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 23802 ATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAA-CATCTAGCTT 23860 ||||||||| |||||||||||||| || || || || || | |||||| | ||| |||| Sbjct 1599 ATACATTTCTGAATGAATATTTTCCATTGCTATTTGGAAACTGTAAAAAGCTTCT-GCTT 1657 Query 23861 CAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCAC 23920 | | || || || || || | |||||||| || |||||||| ||||| || ||||||| Sbjct 1658 CCGGCATTTTTACTTCTTTCAGAAATCTTTCTGCCAAATTTTCATTAACTATTCCATCAC 1717 Query 23921 TAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTT 23980 | || || || || ||||| |||| || |||||| ||| || | | ||| | | Sbjct 1718 TGGCTGCGAAAAAGGCAAGGACATGCGAAATGAAATGTTGTTCTTCCGGTTTTAAGTCGT 1777 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||| ||| ||||||| || |||| | ||| |||||||||||||| Sbjct 1778 TCC-ATC-----TATCTTTCGACAAATTTATTTCTTCAACTGTCCAAAA 1820 >seq247670 Length=3146 Score = 107 bits (118), Expect = 2e-18 Identities = 193/276 (70%), Gaps = 17/276 (6%) Strand=Plus/Plus Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACT----ATACATTTCAGAAT 23815 ||||||| | | ||| || || || |||||||| | ||| ||||||||| |||| Sbjct 903 TTTTTCT-CTTCATCAGTAATGTAAGTATCAATCA----ACTTTGAATACATTTCCGAAT 957 Query 23816 GAATATTTTCAATAGCAATCTGAAACCCATAAAAA-CATCTAGCTTCAGACAATTGAACA 23874 ||| |||||| || || || || || | |||||| | ||| ||||| | || || || Sbjct 958 GAACATTTTCCATCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACT 1016 Query 23875 TCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAA 23934 || | | |||||||| || | ||| || || || || |||||||| || ||||| || Sbjct 1017 TCCTGTAGAAATCTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAAAC 1076 Query 23935 GCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATA 23994 ||||| |||| | || |||| | ||| | | ||||| ||||| || || Sbjct 1077 GCAAGTACATGTGAAATGAAATACTGCTGATCCGACGTTAATTCGTTCCA-TC-----TA 1130 Query 23995 TCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || || |||||| | ||| ||||||||||||||| Sbjct 1131 TCCTTGTTTAAATCGATTTCTTCAACTGTCCAAAAA 1166 >seq201504 Length=1836 Score = 107 bits (118), Expect = 2e-18 Identities = 193/276 (70%), Gaps = 17/276 (6%) Strand=Plus/Minus Query 23760 TTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACT----ATACATTTCAGAAT 23815 ||||||| | | ||| || || || |||||||| | ||| ||||||||| |||| Sbjct 615 TTTTTCT-CTTCATCAGTAATGTAAGTATCAATCA----ACTTTGAATACATTTCCGAAT 561 Query 23816 GAATATTTTCAATAGCAATCTGAAACCCATAAAAA-CATCTAGCTTCAGACAATTGAACA 23874 ||| |||||| || || || || || | |||||| | ||| ||||| | || || || Sbjct 560 GAACATTTTCCATCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACT 502 Query 23875 TCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAA 23934 || | | |||||||| || | ||| || || || || |||||||| || ||||| || Sbjct 501 TCCTGTAGAAATCTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAAAC 442 Query 23935 GCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATA 23994 ||||| |||| | || |||| | ||| | | ||||| ||||| || || Sbjct 441 GCAAGTACATGTGAAATGAAATACTGCTGATCCGACGTTAATTCGTTCCA-TC-----TA 388 Query 23995 TCTTTTGATAAATCAACTTCATCAACTGTCCAAAAA 24030 || || |||||| | ||| ||||||||||||||| Sbjct 387 TCCTTGTTTAAATCGATTTCTTCAACTGTCCAAAAA 352 >seq243336 Length=1505 Score = 104 bits (114), Expect = 2e-17 Identities = 184/264 (70%), Gaps = 16/264 (6%) Strand=Plus/Plus Query 23772 ATCTGTTATATATGTATCAATTAGTAAACT----ATACATTTCAGAATGAATATTTTCAA 23827 ||| || || || |||||||| | ||| ||||||||| ||||||| |||||| | Sbjct 1 ATCAGTAATGTAAGTATCAATCA----ACTTTGAATACATTTCCGAATGAACATTTTCCA 56 Query 23828 TAGCAATCTGAAACCCATAAAAA-CATCTAGCTTCAGACAATTGAACATCATTAAAAAAT 23886 | || || || || | |||||| | ||| ||||| | || || || || | | |||| Sbjct 57 TCGCTATTTGGAAACTGTAAAAAGCTTCT-GCTTCCGGCATTTTTACTTCCTGTAGAAAT 115 Query 23887 CTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATAT 23946 |||| || | ||| || || || || |||||||| || ||||| || ||||| |||| | Sbjct 116 CTTTCTGCAAGATTCTCATTGACGATTCCATCACTGGCCGCAAAAAACGCAAGTACATGT 175 Query 23947 TTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAA 24006 || |||| | ||| | | ||||| ||||| || |||| || |||| Sbjct 176 GAAATGAAATACTGCTGATCCGACGTTAATTCGTTCCA-TC-----TATCCTTGTTTAAA 229 Query 24007 TCAACTTCATCAACTGTCCAAAAA 24030 || | ||| ||||||||||||||| Sbjct 230 TCGATTTCTTCAACTGTCCAAAAA 253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519824101275600