Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq5171 91.5 1e-13 >seq5171 Length=25613 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||| || || ||||||| | || || ||||| |||||| ||| || ||| | Sbjct 8245 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCCCTCT 8186 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || ||| | | || | || || ||| ||||| |||||| | || |||||| Sbjct 8185 GACACGATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCAGATCAG 8126 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || || | ||||| || || |||||||| |||||| || |||| | | ||||||||| Sbjct 8125 CAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGATTACAAT 8066 Query 29142 ATTCAGAAGGAATCTACTCTTCA 29164 ||||| ||||| || || ||||| Sbjct 8065 ATTCAAAAGGAGTCAACCCTTCA 8043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428304286404125