Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1961 82.4 6e-11 >seq1961 Length=16662 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 20946 TTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCC 21005 || || |||| || || || |||| ||| | ||||||||||||||| ||||| ||||| Sbjct 7703 TTGCCGCCTCTGAGTCTAAGGACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCG 7762 Query 21006 GCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACG 21065 | || ||| |||| |||| || || || ||| | ||||| | ||||| || | Sbjct 7763 GAAAGAGTTCTTCCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGG 7822 Query 21066 GGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCC 21125 || | || |||||||| ||||| ||| || | ||| | || | ||||| Sbjct 7823 GGGATACCCTCCTTGTCTTGAATCTTGGTTTTGACGTTCTCGATCGAGTCGCTTGGCTCG 7882 Query 21126 GTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | || |||||||| || || | ||||| ||||| || ||||| Sbjct 7883 ACCTCTAGTGTTATGGTCTTACCAGTAAGAGTTTTTACAAAGATCTGCAT 7932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422227936324700