Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq5171 96.9 3e-15 seq1961 84.2 2e-11 >seq5171 Length=25613 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||| || || ||||||| | || || ||||| |||||| ||| || ||| | Sbjct 8245 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCCCTCT 8186 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || ||| | | || |||| || ||| ||||| |||||| | || |||||| Sbjct 8185 GACACGATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCAGATCAG 8126 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 || || | ||||| || || |||||| | |||||| || |||| | | ||||||||| Sbjct 8125 CAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGATTACAAT 8066 Query 25215 ATTCAAAAGGAATCTACTCTTCA 25237 ||||||||||| || || ||||| Sbjct 8065 ATTCAAAAGGAGTCAACCCTTCA 8043 >seq1961 Length=16662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187 || || || ||| | ||| |||||| ||| | ||||||||||| || || ||||||||| Sbjct 7839 GACAAGGAGGGTATCCCCCCAGATCAGCAACGTCTTATCTTTGCTGGTAAGCAATTGGAA 7780 Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 || | |||| | |||| ||||| || |||||||| || |||||||| |||| Sbjct 7779 GACGGAAGAACTCTTTCCGACTACAACATCCAAAAGGAGTCCACTCTTCATTTGGT 7724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410766384990050