Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq5171 95.1 2e-14 >seq5171 Length=25613 Score = 95.1 bits (104), Expect = 2e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595 || ||||| || ||| | || || || || || |||||||| || | ||| |||| | Sbjct 8248 ACCATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCCC 8189 Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655 ||| || || ||| | ||| || ||||||||||| |||||||| || || ||| Sbjct 8188 TCTGACACGATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCAGAT 8129 Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715 || || | | || || || ||||||||| | || ||| | |||| || ||||| Sbjct 8128 CAGCAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGATTAC 8069 Query 124716 AATATTCAAAAAGAATCAAC 124735 ||||||||||| || ||||| Sbjct 8068 AATATTCAAAAGGAGTCAAC 8049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755398632560000