Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1850 129 5e-25 >seq1850 Length=2515 Score = 129 bits (142), Expect = 5e-25 Identities = 380/581 (65%), Gaps = 6/581 (1%) Strand=Plus/Plus Query 20045 TTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGGT 20104 ||||| || |||| || || ||||||| | || | ||||||| | || |||| Sbjct 1725 TTCCCATACTAACAACCAAGAAAGTATTTTTAAGGGGTATCATTGAAGAACTCTTGTGGT 1784 Query 20105 TTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGA-GTTAAGATTTGGAGC 20163 | ||||||||| |||||| || || ||||| | ||||| |||| ||||||| Sbjct 1785 TCATTAAAGGAAGTACAAATGGTAAAGA-CTTGTCTGACAAGGACGTTAGCATTTGGAAA 1843 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGGGAT 20223 ||| | || | ||| | | | |||| ||| || | || || | |||| || Sbjct 1844 GCAAACGGCTATAAAAGCTACCTCGATAGCATTGGCTTAGCAAATCGAGAGGAGGACGAC 1903 Query 20224 TTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAAC 20283 ||||| ||| | ||||| |||||||||||||| ||| | ||| || ||| || Sbjct 1904 TTGGGACCTATTTATGGTTTTCAATGGAGACACGCTGGTGATGACTACTCTGATTGTCAC 1963 Query 20284 ACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACG 20343 | ||||| || | ||| ||||| | | |||| ||||| || ||||| Sbjct 1964 TCCAATTACAAAGGGAAGGGACATGATCAGCTTTTAGATGTGATTAAGACTATAAAAACT 2023 Query 20344 AACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATG 20403 || || | ||| | ||||| | || | ||||| | || ||| || ||||| Sbjct 2024 AAGCCCTATGACCGTAGAATGCTAATAGTTTCATGGAATGTCAAGGATTTGAAGCTAATG 2083 Query 20404 GCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCGTGT 20463 || ||||| |||||||| ||| || || ||||| | ||| | | | || | Sbjct 2084 GCGTTGCCCACATGTCATTGCCTAGTTCAGTTCTACGTCGAAAATGGTAGACTATCTT-- 2141 Query 20464 CAAA--TGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTT 20521 |||| | |||||| | || ||||| ||||| ||||||| || || || | |||| | Sbjct 2142 CAAAGCTCTATCAAAGGTCTGCTGACATGGGTTTGGGTGTGCCATTTAAACTAACAAGCT 2201 Query 20522 ATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCC 20581 |||| |||| ||| | |||||||| || || | |||| || ||| || | | Sbjct 2202 ATGCTTTGCTCACGCACATGATTGCTCACGTCTGTGGTTTACAATGTAATGAATTCATTC 2261 Query 20582 ACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAA 20622 | ||| | ||||| || || ||||||||||||||| || || Sbjct 2262 ATACCTTTGGAGATGCCCAGATTTACCTTAATCATGTATAA 2302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399154444790875