Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3112 95.1 9e-15 >seq3112 Length=23135 Score = 95.1 bits (104), Expect = 9e-15 Identities = 283/435 (65%), Gaps = 4/435 (1%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||| | || || || ||| | | || |||||||| || || || ||||||||| Sbjct 5360 TGGCCTTTTCCGCCGTAGAGGGCATATTCTTCTCTGGGTCCTTCGCAGCGATATTCTGGA 5419 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 ||||||||||| ||| |||| || | | ||| ||| ||| | || || || | Sbjct 5420 TGAAGAAACGTGGACTCTTGCCGGGTCTCACCTTTAGCAATGAGCTCATCTCTCGCGATG 5479 Query 22868 AAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 |||| ||||| |||||||| ||| | || |||| || ||| |||||||| Sbjct 5480 AAGGCCTACATACCGACTTTGCCTGTCTCCTCTTTAAACACATGAAGAACAAACCTACCG 5539 Query 22928 AGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTCTTCCAAG 22987 || | | | ||| ||||| | | || || || |||||| || ||| | | | Sbjct 5540 TGGCCAAAGTGCATGAAATCGTTGCCGAAGCTGTGCTCATTGAACAGGAATTCCTACGCG 5599 Query 22988 AGGCACTAAAGACACCCCTACTTGGTATGAATAGTGACAGT--ATGAGACTGTACATACA 23045 | || || || |||| |||| | || ||| ||| | | |||||| | Sbjct 5600 ATGCCCTTCCTTGTAGTCTGATTGGAATGA--ACTGCAAGTTGATGTGTCAGTACATTGA 5657 Query 23046 GTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGTTGCCAA 23105 ||||| || ||||| ||||| | | ||| | ||||| | ||| | | || Sbjct 5658 ATTTGTGGCCGATCGTCTGCTGGTGGAGCTGTCGTGCCCAAAGTATTGGAACTCTACGAA 5717 Query 23106 TCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGAACGCCG 23165 || ||||| || ||||| || ||| | ||||| ||||||||||| || ||| | || Sbjct 5718 CCCCTTTGACTTTATGGAGAATATTTCACTGGAAGGGAAAACAAACTTTTTCGAAAGACG 5777 Query 23166 TGTGAGTGAATATCA 23180 ||| | || ||||| Sbjct 5778 TGTTGGGGACTATCA 5792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356207224798225