Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq5171 95.1 1e-14 >seq5171 Length=25613 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 48523 ATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTG 48582 |||||| || |||||||||||| |||||||||| | || | || || || || Sbjct 8042 ATGAAGGGTTGACTCCTTTTGAATATTGTAATCAGATAGAGTTCTGCCATCTTCAAGTTG 8101 Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642 || ||| || | ||||| ||||||||||| || | || |||||| || ||| || Sbjct 8102 TTTTCCGGCGAAGATTAATCGCTGCTGATCTGGAGGAATACCTTCCTTATCTTGAATCTT 8161 Query 48643 CTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 |||| | | | || || || | | ||| ||||| || || |||||||| || Sbjct 8162 GGCTTTGACATTCTCGATCGTGTCAGAGGGCTCAACCTCGAGGGTAATAGTTTTACCAGT 8221 Query 48703 GAGAGTTTTCACAAAAATCTGCATCGT 48729 |||||||| |||||||||||||| || Sbjct 8222 AAGAGTTTTGACAAAAATCTGCATGGT 8248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421220010956075