Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq5171 93.3 4e-14 >seq5171 Length=25613 Score = 93.3 bits (102), Expect = 4e-14 Identities = 145/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 ||||| ||||| |||||||||||||| || || || ||||| |||||| |||| || Sbjct 8252 ATTAACCATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGA 8193 Query 115339 GTCCAGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCG 115397 | || ||||| | | || || || ||| || ||| ||||| ||||| | || Sbjct 8192 GCCCTCTGACAC-GATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTC 8134 Query 115398 TTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCG 115457 |||||||| || | || | || || |||||| | ||||||| || ||| | | | Sbjct 8133 CAGATCAGCAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTG 8074 Query 115458 ATTATAACATTCAAAAAGAGTCTAC 115482 |||| || |||||||| ||||| || Sbjct 8073 ATTACAATATTCAAAAGGAGTCAAC 8049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425312507929000