Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5171 113 4e-20 >seq5171 Length=25613 Score = 113 bits (124), Expect = 4e-20 Identities = 157/215 (73%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTC 131081 || || | ||| | ||| |||||||||||||| |||||||| | || | || | || Sbjct 8034 AGGACGAGATGAAGGGTTGACTCCTTTTGAATATTGTAATCAGATAGAGTTCTGCCA-TC 8092 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 || || || || || ||| ||||||| |||||||| || ||||| || ||||| || || Sbjct 8093 TTCAAGTTGTTTTCCGGCGAAGATTAATCGCTGCTGATCTGGAGGAATACCTTCCTTATC 8152 Query 131142 GGTGATTTTCTGCTT-GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGG 131200 ||| | | |||| || | ||| | || || | || ||| | |||| ||||| | Sbjct 8153 T-TGAATCTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCAACCTCGAGGGTAATAG 8211 Query 131201 TTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||||| || |||||||| || |||||||||||| Sbjct 8212 TTTTACCAGTAAGAGTTTTGACAAAAATCTGCATG 8246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471976956528000