Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5171 122 8e-23 >seq5171 Length=25613 Score = 122 bits (134), Expect = 8e-23 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 ||| ||||| || ||||| || ||| | || |||||| | || || |||| || ||| | Sbjct 8249 AACCATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCC 8190 Query 25055 GTCTGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 |||||||| |||||| | || |||| || | ||| || || ||||| ||||| || Sbjct 8189 CTCTGACACGATCGAG--AATGTCAAAGCCAAGATTCAA-GATAAGGAAGGTATTCCTCC 8133 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 || || ||||| | || || ||||| |||||| | ||||||| | ||| | || Sbjct 8132 AGATCAGCAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGA 8073 Query 25172 TTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||||||||||||| || || || || ||| | || || || || ||||| || Sbjct 8072 TTACAATATTCAAAAGGAGTCAACCCTTCATCTCGTCCTCAGACTTAGAGGTGG 8019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433295916801125