Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq1961 111 1e-19 seq976 82.4 6e-11 >seq1961 Length=16662 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| |||||| | || ||||| || | || || || || || | | | Sbjct 7932 ATGCAGATCTTTGTAAAAACTCTTACTGGTAAGACCATAACACTAGAGGTCGAGCCAAGC 7873 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | || | ||||| || |||||||||||||||||||| || || ||||| Sbjct 7872 GACTCGATCGAGAACGTCAAAACCAAGATTCAAGACAAGGAGGGTATCCCCCCAGATCAG 7813 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 ||||||||||| ||||| || || || || || || | || | ||||| |||||| Sbjct 7812 CAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGAAGAACTCTTTCCGACTACAAC 7753 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGT 22427 || ||||| || ||||| | ||||| || Sbjct 7752 ATCCAAAAGGAGTCCACTCTTCATTTGGT 7724 >seq976 Length=29826 Score = 82.4 bits (90), Expect = 6e-11 Identities = 138/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 129697 ATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAATTTCGGCG 129756 || ||||||| |||||||| ||| | || | |||||| || |||||||| | | Sbjct 23158 ATTGAGGCCAGGTTGCAGACTGCAATCTCATCAGGTGAACTGTATTCTACAATTTCTGTG 23099 Query 129757 CACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATT--ACTTTTCATGTTGCAAG 129814 |||| |||| | | |||||| |||||||| | ||||| ||||| || | || | Sbjct 23098 CACAGATTAGAACTACGAATGGTCCCCAAATGTTGCTGATTCGACTTTGAAT--TACAGG 23041 Query 129815 CATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTGCGTTTCGACAATGGTCCTGA 129874 |||||||||| | | ||| || | || ||||||| ||| | || ||||| | Sbjct 23040 CATCTTTGTAGAGAACGTATGGATTACCAGTTTCGATTTGTGCATCAACAATTGCGTACC 22981 Query 129875 ACAAGTCTCGAGCCTTGA 129892 |||| || |||||||||| Sbjct 22980 ACAACTCCCGAGCCTTGA 22963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419696923732375