Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4503 95.1 2e-14 seq4954 86.0 1e-11 >seq4503 Length=44694 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||| ||||||||||||||| ||||||||||||| |||||||||||| || Sbjct 11038 AGCCCGGTTATCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCTAG 10979 Query 142563 CCCCACATCGGG 142574 |||||||||||| Sbjct 10978 CCCCACATCGGG 10967 >seq4954 Length=2017 Score = 86.0 bits (94), Expect = 1e-11 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 142505 CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCC 142564 |||| |||| |||||||||||||| ||||||||||||| ||||||||||||||||| Sbjct 473 CCCGATTAGTTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGCC 414 Query 142565 CCACATCGGG 142574 | |||||||| Sbjct 413 CTACATCGGG 404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027756797359075