Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3112 109 1e-18 >seq3112 Length=23135 Score = 109 bits (120), Expect = 1e-18 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 42636 TGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTC 42695 ||| | |||||||| || || ||||| ||||| |||||| | | || ||| || Sbjct 5287 TGCGTGAAGAAGAAAGCCGATTGGGCCCTCAAATGGATCTCGGATATGAACTCAAACTTT 5346 Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 |||| |||| || |||||| ||||||| |||||||| |||||||| || ||||||| Sbjct 5347 TCCGAGCGGCTAGTGGCCTTTTCCGCCGTAGAGGGCATATTCTTCTCTGGGTCCTTCGCA 5406 Query 42756 TCCATCTTCTGGCTCAAGCAGAAGGTG---TCGATGCCCGGACTCACCTTCTCGAACGAA 42812 | || |||||| | ||| | | ||| || |||| || |||||||| || || Sbjct 5407 GCGATATTCTGGATGAAGAA--ACGTGGACTCT-TGCCGGGTCTCACCTTTAGCAATGAG 5463 Query 42813 CTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTT 42862 |||||| | || || || || |||| ||||||||||| ||||| || Sbjct 5464 CTCATCTCTCGCGATGAAGGCCTACATACCGACTTTGCCTGTCTCCTCTT 5513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944267489242000