Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_011055.1 Length=76312 Score E Sequences producing significant alignments: (Bits) Value seq1154 111 8e-20 >seq1154 Length=36805 Score = 111 bits (122), Expect = 8e-20 Identities = 275/415 (66%), Gaps = 7/415 (2%) Strand=Plus/Plus Query 65089 GGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 65148 || ||||||||||| || | ||||| || || || || | | ||| || | | Sbjct 10591 GGATCTATCGCTCTCGATGATGCTCTCGGT---GGTGGCTATGCCAAGGGTCGTATCATA 10647 Query 65149 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 65208 || ||||| || |||||||| || || ||| | |||||| || || || | || | Sbjct 10648 GAGATCTATGGTCCAGAATCCTCTGGTAAGACGACTCTGACACTTCATGCTATTGCTGAG 10707 Query 65209 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 65268 | || ||||| | || | || || | |||| || |||||| | || || |||| Sbjct 10708 GTACAAAAGGCATGAGGAACTGCAGCATTTGTCGATGCGGAGCACGCTCTCGATCCTGCC 10767 Query 65269 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 65328 || |||||| ||||||| | |||| | ||| | | |||||| ||| ||| Sbjct 10768 TATGCCAAGAGTATCGGTGTCAATATCGATGATCTCATCATCTCTCAGCCAGACTATGGT 10827 Query 65329 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG--TCG 65386 ||||| || || ||||| || || |||||| ||| || |||||| ||| ||| Sbjct 10828 GAGCAAGCTCTCGAGATAGTCGATGCACTCGTCCGGTCAGG--AGCTGTGGATCTCATCG 10885 Query 65387 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 65446 |||||||||||||||| || || || || ||| |||| || | || || || | Sbjct 10886 TCGTTGACTCTGTGGCAGCACTCACCCCAAAGGCGGAGATCGAGGGAAATATGGGAGATA 10945 Query 65447 GTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACTGG 65501 || | || || || || || || ||||| ||||| | |||||| |||| || Sbjct 10946 GTTTTATGGGACTCCATGCTCGTCTGATGTCTCAGGCTCTCCGCAAGGTCACGGG 11000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244055529019475