Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq1154 89.7 2e-13 >seq1154 Length=36805 Score = 89.7 bits (98), Expect = 2e-13 Identities = 268/413 (65%), Gaps = 3/413 (1%) Strand=Plus/Plus Query 65922 GGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGCCGGGTAGTG 65981 || || || ||||| || | |||||||| || || ||| | | ||| || | | Sbjct 10591 GGATCTATCGCTCTCGATGATGCTCTCGGT---GGTGGCTATGCCAAGGGTCGTATCATA 10647 Query 65982 GAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCGGTGGCCAAT 66041 |||||||| ||||| || || || || ||| | || || || || || | || | Sbjct 10648 GAGATCTATGGTCCAGAATCCTCTGGTAAGACGACTCTGACACTTCATGCTATTGCTGAG 10707 Query 66042 GCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTCGACCCTGAG 66101 | || ||||| | || | || || | |||| || || || ||||||| |||| Sbjct 10708 GTACAAAAGGCATGAGGAACTGCAGCATTTGTCGATGCGGAGCACGCTCTCGATCCTGCC 10767 Query 66102 TACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAGACACTGGC 66161 || ||| | |||| || || |||| ||||| | | ||||||||| ||| Sbjct 10768 TATGCCAAGAGTATCGGTGTCAATATCGATGATCTCATCATCTCTCAGCCAGACTATGGT 10827 Query 66162 GAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCATCATCGTT 66221 ||||| || || ||||| || || |||||| ||| || | || ||||||| Sbjct 10828 GAGCAAGCTCTCGAGATAGTCGATGCACTCGTCCGGTCAGGAGCTGTGGATCTCATCGTC 10887 Query 66222 GTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCG 66281 || ||||||||||| || || || ||||||| |||| || | || || || Sbjct 10888 GTTGACTCTGTGGCAGCACTCACCCCAAAGGCGGAGATCGAGGGAAATATGGGAGATAGT 10947 Query 66282 CACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGG 66334 | || || ||||| || |||||||||||||| | |||||| | || || Sbjct 10948 TTTATGGGACTCCATGCTCGTCTGATGTCTCAGGCTCTCCGCAAGGTCACGGG 11000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242452447718900