Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq1961 100 3e-16 >seq1961 Length=16662 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 |||| ||||| ||||| | | | |||| ||| | || |||||||||||| |||| Sbjct 7698 ATTAATTGCCGCCTCTGAGTCTAAGGACCAAATGAAGAGTGGACTCCTTTTGGATGTTGT 7757 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 ||||||| ||||| | |||| || | ||||| || || || || | || ||||| | Sbjct 7758 AGTCGGAAAGAGTTCTTCCGTCTTCCAATTGCTTACCAGCAAAGATAAGACGTTGCTGAT 7817 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | | ||||||||| ||||| | |||| || | | || |||||| | Sbjct 7818 CTGGGGGGATACCCTCCTTGTCTTGAATCTTGGTTTTGACGTTCTCGATCGAGTCGCTTG 7877 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || | || ||||| || || || || ||||| |||||||| ||||| Sbjct 7878 GCTCGACCTCTAGTGTTATGGTCTTACCAGTAAGAGTTTTTACAAAGATCTGCAT 7932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565195477209000