Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq3112 125 8e-24 >seq3112 Length=23135 Score = 125 bits (138), Expect = 8e-24 Identities = 306/460 (67%), Gaps = 8/460 (2%) Strand=Plus/Minus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || |||||||| || ||||| |||||||||||||| ||||| || ||||| Sbjct 5808 CATAACGCCAGCCTTTTGATAGTCCCCAACACGTCTTTCGAAAAAGTTTGTTTTCCCTTC 5749 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATA-GTACTACATG 36990 ||||| ||||| |||||||| ||||| || || | | || | ||| | || | Sbjct 5748 CAGTGAAATATTCTCCATAAAGTCAAAGGGGTTCGTAGAGTTCCA-ATACTTTGGGCACG 5690 Query 36991 ATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGT 37050 | | ||| ||| || | ||| || |||||||| ||||| | |||||| | | ||| Sbjct 5689 ACAGCTCCACCAGCAGACGATCGGCCACAAATTCAATGTACTGACACATCAACTTGCAGT 5630 Query 37051 TTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAG 37110 | || ||||| || | |||| ||||| | || ||| | ||| || | |||| Sbjct 5629 TCATTCCAATCAGACTACAAGGAAGGGCATCGCGTAGGAATTCCTGTTCAATGAGCACAG 5570 Query 37111 CATCTTTAACTATATTAACAATAACTT---CTTCAGTTGGGGGATATTTTAAATATTTAA 37167 | || ||| || | || |||| | | || || | || | | ||||| Sbjct 5569 CTTCGGCAACGATTT---CATGCACTTTGGCCACGGTAGGTTTGTTCTTCATGTGTTTAA 5513 Query 37168 ACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAA 37227 | | | ||| ||||| || ||||| |||||||| | | || | ||||| || Sbjct 5512 AGAGGAGACAGGCAAAGTCGGTATGTAGGCCTTCATCGCGAGAGATGAGCTCATTGCTAA 5453 Query 37228 AGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAG 37287 |||| | || |||| | || | ||| || ||||| ||||| ||||| || || |||| Sbjct 5452 AGGTGAGACCCGGCAAGAGTCCACGTTTCTTCATCCAGAATATCGCTGCGAAGGACCCAG 5393 Query 37288 AAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACG 37327 | ||||| || || || || || | ||| || || || || Sbjct 5392 AGAAGAATATGCCCTCTACGGCGGAAAAGGCCACTAGCCG 5353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592271820943000