Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq5171 113 7e-20 >seq5171 Length=25613 Score = 113 bits (124), Expect = 7e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| | ||||| ||||||||||| | || || || ||| Sbjct 8245 ATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCCCTCT 8186 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || || ||| || || |||||||| ||||| || |||||||| || Sbjct 8185 GACACGATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCAGATCAG 8126 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || |||| || | ||||| || || || |||||| ||||||| |||| ||||| ||| Sbjct 8125 CAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGATTACAAT 8066 Query 156003 ATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 || || ||| ||| | || |||||| | || | ||| | ||||| ||| Sbjct 8065 AT-TCAAAAGGAGTCAACCCTTCATCTCGTCCTCAGACTTAGAGGTGGT 8018 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731816423470000