Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq5171 132 4e-26 seq1961 111 1e-19 >seq5171 Length=25613 Score = 132 bits (146), Expect = 4e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| ||| | ||||| || || |||||||||||||| ||||| || || || Sbjct 8248 ACCATGCAGATTTTTGTCAAAACTCTTACTGGTAAAACTATTACCCTCGAGGTTGAGCCC 8189 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | ||||| | || | || ||| ||||| ||||| || ||||| || ||||| ||| Sbjct 8188 TCTGACACGATCGAGAATGTCAAAGCCAAGATTCAAGATAAGGAAGGTATTCCTCCAGAT 8129 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 || || || || ||||| ||||| ||||| || || ||| |||| | || ||||| Sbjct 8128 CAGCAGCGATTAATCTTCGCCGGAAAACAACTTGAAGATGGCAGAACTCTATCTGATTAC 8069 Query 24881 AACATTCAAAAGGAATCGACACTACA 24906 || ||||||||||| || || || || Sbjct 8068 AATATTCAAAAGGAGTCAACCCTTCA 8043 >seq1961 Length=16662 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| || || ||||| || || || || || || || | | | Sbjct 7932 ATGCAGATCTTTGTAAAAACTCTTACTGGTAAGACCATAACACTAGAGGTCGAGCCAAGC 7873 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| | | || |||| ||||| ||||| |||||||| || || || || || ||||| Sbjct 7872 GACTCGATCGAGAACGTCAAAAC-CAAGATTCAAGACAAGGAGGGTATCCCCCCAGATCA 7814 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||||| | |||||||| || || || |||| || |||| | || || || || Sbjct 7813 GCAACGTCTTATCTTTGCTGGTAAGCAATTGGAAGACGGAAGAACTCTTTCCGACTACAA 7754 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGT 24912 ||| |||||||| || || || || ||||| Sbjct 7753 CATCCAAAAGGAGTCCACTCTTCATTTGGT 7724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449863435901000