Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1961 104 2e-17 >seq1961 Length=16662 Score = 104 bits (114), Expect = 2e-17 Identities = 159/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||||||||| ||||| || ||||| ||||| || || | || || | || Sbjct 7721 AGGACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTTCCGTCT 7780 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCT 29694 || | ||| || |||||| | || | | ||||||||| || || |||||||| |||||| Sbjct 7781 TCCAATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGGATACCCTCCTTGTCT 7840 Query 29695 TGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 || ||| || | |||||| | || | | ||| | || || || || ||||| || Sbjct 7841 TG-AATCTTGGTTTTGACGTTCTCGATCGAGTCGCTTGGCTCGACCTCTAGTGTTATGGT 7899 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTAAAACGTA 29797 || ||||| | ||||| ||||| |||||||| || || ||| Sbjct 7900 CTTACCAGTAAGAGTTTTTACAAAGATCTGCATAATAGAATGTA 7943 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385190678731575