Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq1961 95.1 1e-14 seq3112 86.0 6e-12 >seq1961 Length=16662 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262 || ||||||| || || || ||||| |||||||| ||| | || || |||||| Sbjct 7724 ACCAAATGAAGAGTGGACTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCTTCCGTCTTCC 7783 Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322 | ||| ||||||||| |||| |||||||||||||| || || || || || ||||| | Sbjct 7784 AATTGCTTACCAGCAAAGATAAGACGTTGCTGATCTGGGGGGATACCCTCCTTGTCTTGA 7843 Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382 || || ||| | | || | || ||| | || || || || | || | ||||| Sbjct 7844 ATCTTGGTTTTGACGTTCTCGATCGAGTCGCTTGGCTCGACCTCTAGTGTTATGGTCTTA 7903 Query 137383 CCGGTCAATGTTTTTACGAATATTTGCATA 137412 || || | |||||||| || || |||||| Sbjct 7904 CCAGTAAGAGTTTTTACAAAGATCTGCATA 7933 >seq3112 Length=23135 Score = 86.0 bits (94), Expect = 6e-12 Identities = 128/175 (73%), Gaps = 5/175 (3%) Strand=Plus/Plus Query 50559 GGCATGAAC-GCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTT 50617 || |||||| ||| | ||||||| |||||||||| ||||| || || | || || | Sbjct 5623 GGAATGAACTGCA-AGTTGATGTGTCAGTACATTGAATTTGTGGCCGATCGTCTGCTGGT 5681 Query 50618 GCAGCTGGGACAACCGAAATACTATAATGC-ACGTAACCCCTTTCCGTTTATGAATAACA 50676 | ||||| || || || | || | ||| ||||||||| |||||| | || | Sbjct 5682 GGAGCTGTCGTGCCCAAAGTATTGGAACTCTACG-AACCCCTTTGACTTTATGGAGAATA 5740 Query 50677 TATCGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATA-CAAAA 50730 | || |||| || |||||||||||||||||||||||||| || || || ||||| Sbjct 5741 TTTCACTGGAAGGGAAAACAAACTTTTTCGAAAGACGTGTTGGGGACTATCAAAA 5795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488506901190000