Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_023689.1 Length=76260 Score E Sequences producing significant alignments: (Bits) Value seq1154 105 3e-18 >seq1154 Length=36805 Score = 105 bits (116), Expect = 3e-18 Identities = 274/415 (66%), Gaps = 7/415 (2%) Strand=Plus/Plus Query 66187 GGCTCTATCGCCCTGGACGGCGCTCTGGGCATCGGGGGGTACCCGAGGGGCCGGGTGGTG 66246 || |||||||| || || | ||||| || || || || | | ||| || | | Sbjct 10591 GGATCTATCGCTCTCGATGATGCTCTCGGT---GGTGGCTATGCCAAGGGTCGTATCATA 10647 Query 66247 GAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGTCTCCACGCGGTGGCCAAT 66306 || ||||| || |||||||| || || ||| | |||||| || || || | || | Sbjct 10648 GAGATCTATGGTCCAGAATCCTCTGGTAAGACGACTCTGACACTTCATGCTATTGCTGAG 10707 Query 66307 GCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAG 66366 | || ||||| | || | || || | |||| || |||||| | || || |||| Sbjct 10708 GTACAAAAGGCATGAGGAACTGCAGCATTTGTCGATGCGGAGCACGCTCTCGATCCTGCC 10767 Query 66367 TACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGC 66426 || |||||| ||||||| | |||| | ||| | | |||||| ||| ||| Sbjct 10768 TATGCCAAGAGTATCGGTGTCAATATCGATGATCTCATCATCTCTCAGCCAGACTATGGT 10827 Query 66427 GAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGCGAGCTGTCCATCG--TCG 66484 ||||| || || ||||| || || |||||| ||| || |||||| ||| ||| Sbjct 10828 GAGCAAGCTCTCGAGATAGTCGATGCACTCGTCCGGTCAGG--AGCTGTGGATCTCATCG 10885 Query 66485 TCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACA 66544 |||||||||||||||| || || || || ||| |||| || | || || || | Sbjct 10886 TCGTTGACTCTGTGGCAGCACTCACCCCAAAGGCGGAGATCGAGGGAAATATGGGAGATA 10945 Query 66545 GTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGCAAGCTCACCGG 66599 || | || || || || || || ||||| ||||| | |||||| |||| || Sbjct 10946 GTTTTATGGGACTCCATGCTCGTCTGATGTCTCAGGCTCTCCGCAAGGTCACGGG 11000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 243889141339575