Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq976 136 9e-27 >seq976 Length=29826 Score = 136 bits (150), Expect = 9e-27 Identities = 290/430 (67%), Gaps = 5/430 (1%) Strand=Plus/Plus Query 110468 TCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGG-ACAATTGGCTTCTTGCT 110526 ||| || |||| ||||| |||||| | || ||| | || |||| || | ||||| Sbjct 22409 TCACGCGTCTCCCACCCTCTTTAACTCGGGCACTCC-GCAGCCACAAATGTCCAGTTGCT 22467 Query 110527 TTCTTCTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTG 110586 | || || ||| || |||||| ||||||||| || || || |||| ||| || || Sbjct 22468 TCCTCCTTACAATGAATGATGATAGTATTGAAGGCATATACGAGACTCTCAAACAATGTG 22527 Query 110587 CTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAG 110646 | ||||| |||||||| |||| || ||||| | || || ||||||| | Sbjct 22528 CCCTTATCTCTAAAAATGCTGGTGGTATTGGCCTCAGTGTGCACACTATTCGCGGCTCTG 22587 Query 110647 GAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCT 110706 | ||| | || || | |||| |||| || | ||| | |||| ||| | ||||||| Sbjct 22588 GCGCATACATTTCAGGAACGAATGGTGAATCGAATGGCATCATTCCCATGCTCAGAGTCT 22647 Query 110707 TCAACGACACTGCAAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTA 110763 | || |||| || ||||| | ||||| ||||| |||| ||| | ||||| | Sbjct 22648 TTAATAACACCGCTCGTTATGTTGACCAAGGAGGTAATAAGAGACCTGGAGCTTTTGCCA 22707 Query 110764 TCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAG 110823 | ||||||||||| |||||| | || || || || | || | | |||||| | Sbjct 22708 TTTATCTCGAACCATGGCATCCGGACATTTTCTCCTTTGTCGAGATGAGAAAAAATACTG 22767 Query 110824 GATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCA 110883 | |||||| ||||| ||||| | || ||||| | ||||| |||||||||||| Sbjct 22768 GTGCAGAAGAAGTGAGAGCTCGTGACCTCTTCTATGCCCTTTGGATACCAGATTTATTCA 22827 Query 110884 TGAAACGTGT 110893 || | ||||| Sbjct 22828 TGGAGCGTGT 22837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186720423313075