Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq6054 84.2 2e-11 >seq6054 Length=165052 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 126077 CATA-TGATTGGAATAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAA 126135 |||| |||||| ||| |||||| |||| ||||||||||| | |||||||| |||| | Sbjct 40776 CATAGTGATTGTGATAGATATGTACATCGCCAAATGTATGGACAAATTCACCAGCCTCCA 40835 Query 126136 GTCCACATTCTTTTGC-AACAAGATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGA 126194 |||| | | | | || | || || || || | || || ||| |||||||| ||| Sbjct 40836 GTCCGCTTGCCTGAGCTATCATCAT-AGTGAGAAGTGCGTATGATGCGATATTGAATGGA 40894 Query 126195 ACACCTAAAAATATATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGT 126254 ||||| | ||||| ||| || | ||||| | ||||| | ||| || || | Sbjct 40895 ACACCGAGAAATACATCTGCTGAGCGCTGATAGAGCTGACAGGAGAGTTTGCCATCAGCT 40954 Query 126255 ACGTAAAATTGAAACATTGTGTGGCAAGGTGG 126286 || ||||| ||||||| ||| || || || || Sbjct 40955 ACATAAAACTGAAACAGTGTATGACATGGAGG 40986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408568147757525