Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq6054 84.2 2e-11 >seq6054 Length=165052 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 125355 CCCCCATGCCACACAATGTTCCAGTTTTACGTAGGTAAAGACAACACGCTAAGCTGCAAG 125414 || ||||| || ||| |||| |||||||| |||| | | | ||| || || ||| || Sbjct 40986 CCTCCATGTCATACACTGTTTCAGTTTTATGTAGCTGATGGCAA-ACTCTC--CTGTCAG 40930 Query 125415 ATGTATCAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGCTACGCA 125474 | ||||| || |||||||| |||||| | || || ||||||||||||||| |||||| Sbjct 40929 CTCTATCAGCGCTCAGCAGATGTATTTCTCGGTGTTCCATTCAATATCGCATCATACGCA 40870 Query 125475 CTATTGACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATTCATACC 125534 || | ||| | || || || | || | | | || |||| | ||||| Sbjct 40869 CTTCTCACTATGATGATAGCTCAGGCAAGCGGACTGGAGGCTGGTGAATTTGTCCATACA 40810 Query 125535 TTTGGTGACGCTCATATCTATAACAACCAC 125564 ||||| || | ||||||||| |||| ||| Sbjct 40809 TTTGGCGATGTACATATCTATCACAATCAC 40780 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484369615389000