Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gyrodactylus_20salaris_20[genbank_20GCA_5F000715275.1_202014-06-27] 6,075 sequences; 67,380,660 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3112 118 9e-22 >seq3112 Length=23135 Score = 118 bits (130), Expect = 9e-22 Identities = 192/274 (70%), Gaps = 2/274 (1%) Strand=Plus/Minus Query 4817 AATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTG 4876 ||| || ||||| || ||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct 5167 AATGTAGGTGTCAATCAGTAGAGAGTACATTTCCGAATGAATATTCTCTATTGCAATCTG 5108 Query 4877 AAATCCGTAAAAGCATCTAGCTTCTGTTA-CTTGAACTTCGTTACAAAATCTTTCTACTA 4935 || ||| ||| ||| ||||| | | ||||| || | | || || ||||| || | Sbjct 5107 GAAGGAGTAGAAGGCTCTGGCTTCGGGAATCTTGACCT-CTTGGCAGAACCTTTCCACGA 5049 Query 4936 AGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGT 4995 |||||| || || ||||| || || || || || |||| ||||| || | ||||| Sbjct 5048 GATTTTCGAGGACGATTCCGTCGCTAGCAGCGAAGAAGGCCAGCACATGCGAGAGAAAGT 4989 Query 4996 ACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTT 5055 |||| ||| || || | | ||| || | ||||| | || ||||| |||| Sbjct 4988 GGCGTTCTTCATCTTTGAGGTCCTGCCAATGCTTGAGGTCTTTCGATATGTCAACCTCTT 4929 Query 5056 CAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 ||||||||||||| || || | || ||||| || Sbjct 4928 CAACAGTCCAAAAAGAGGCGACAGCCTTTTTATA 4895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427017981647975