Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq4589 161 1e-34 >seq4589 Length=3505 Score = 161 bits (178), Expect = 1e-34 Identities = 514/791 (65%), Gaps = 16/791 (2%) Strand=Plus/Plus Query 16006 CTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACAT 16065 |||| ||| ||||| ||||||| | | ||| || ||||| ||| || |||||||| Sbjct 2186 CTTATCGTAGCCCAGCTCCGTAAGCAGCCGATCAGCAACAAACCTTATGTACTGACACAT 2245 Query 16066 TAAGTCGCAATTAATTCCTATAAG-TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTT 16124 || | ||||| || || ||||| ||| || || | || | ||| | |||| || Sbjct 2246 TAGGCGACAATTCATGCCGATAAGATCG-ACAGGTAAGGCATCTGTGAGGAATTCACATT 2304 Query 16125 CTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTA 16184 |||| || || || | || || || ||| | | | | ||| ||| | | Sbjct 2305 CTATGCTGACGGCCTCCGTCATAATGTCATACACTCTTTCTGCTGTAGGTTTATTGACAA 2364 Query 16185 GGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTT 16244 ||| || || ||||||||||| |||||| || || ||||| || | ||||| || | Sbjct 2365 TGTGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCT 2424 Query 16245 CGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAA 16304 |||| || || | || ||||| || || ||||| | ||| || || | ||||| Sbjct 2425 CGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAA 2484 Query 16305 ATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACG 16364 | || || || ||||| | |||||||| || || ||||| | | || || ||||||| Sbjct 2485 ACGAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACG 2544 Query 16365 TAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCA 16424 || ||||| ||||| || || |||| || || || | | || || Sbjct 2545 ATGCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCA 2604 Query 16425 TCGTTTCTATGGCCTTAA--ACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATC 16482 ||||| ||||| |||| | || || | | | | | || | | ||| ||||| Sbjct 2605 GCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCG--GGTCCTTGACATATGTATC 2662 Query 16483 AATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAA 16542 ||||| | | |||||||| || || |||||||| | ||| | || | |||||| || Sbjct 2663 GATCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAA 2722 Query 16543 GCATCGAGCCTCCGCTATTTGTACTTC--CACGTAAAATC---GTTCCGCCAGGTTCTCA 16597 || |||||||| | | ||| ||||| || ||| || ||| | || || Sbjct 2723 ACAACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTT-----AAATTTTCG 2777 Query 16598 TTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCG 16657 || ||||| || ||||| || ||||| || |||| | | | ||| || | | ||| Sbjct 2778 TTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCA 2837 Query 16658 TCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTC 16717 || | ||| | | |||||| | | ||| || | || ||| || || || |||| Sbjct 2838 CCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTC 2897 Query 16718 CAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAAT 16777 ||||| ||| || || || ||||| | | |||||| |||| |||||||| || | Sbjct 2898 CAAAAAGAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATC 2957 Query 16778 ACGACGTATCT 16788 ||||| |||| Sbjct 2958 ACGACAAATCT 2968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511222037866120