Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 161 1e-34
>seq4589
Length=3505
Score = 161 bits (178), Expect = 1e-34
Identities = 514/791 (65%), Gaps = 16/791 (2%)
Strand=Plus/Plus
Query 16006 CTTAGAGTACCCCAGTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACAT 16065
|||| ||| ||||| ||||||| | | ||| || ||||| ||| || ||||||||
Sbjct 2186 CTTATCGTAGCCCAGCTCCGTAAGCAGCCGATCAGCAACAAACCTTATGTACTGACACAT 2245
Query 16066 TAAGTCGCAATTAATTCCTATAAG-TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTT 16124
|| | ||||| || || ||||| ||| || || | || | ||| | |||| ||
Sbjct 2246 TAGGCGACAATTCATGCCGATAAGATCG-ACAGGTAAGGCATCTGTGAGGAATTCACATT 2304
Query 16125 CTATCACAACCGCTTCTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTA 16184
|||| || || || | || || || ||| | | | | ||| ||| | |
Sbjct 2305 CTATGCTGACGGCCTCCGTCATAATGTCATACACTCTTTCTGCTGTAGGTTTATTGACAA 2364
Query 16185 GGTGTTTAAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTT 16244
||| || || ||||||||||| |||||| || || ||||| || | ||||| || |
Sbjct 2365 TGTGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCT 2424
Query 16245 CGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAA 16304
|||| || || | || ||||| || || ||||| | ||| || || | |||||
Sbjct 2425 CGTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAA 2484
Query 16305 ATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACG 16364
| || || || ||||| | |||||||| || || ||||| | | || || |||||||
Sbjct 2485 ACGAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACG 2544
Query 16365 TAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCA 16424
|| ||||| ||||| || || |||| || || || | | || ||
Sbjct 2545 ATGCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCA 2604
Query 16425 TCGTTTCTATGGCCTTAA--ACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATC 16482
||||| ||||| |||| | || || | | | | | || | | ||| |||||
Sbjct 2605 GCGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCG--GGTCCTTGACATATGTATC 2662
Query 16483 AATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAA 16542
||||| | | |||||||| || || |||||||| | ||| | || | |||||| ||
Sbjct 2663 GATCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAA 2722
Query 16543 GCATCGAGCCTCCGCTATTTGTACTTC--CACGTAAAATC---GTTCCGCCAGGTTCTCA 16597
|| |||||||| | | ||| ||||| || ||| || ||| | || ||
Sbjct 2723 ACAACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTT-----AAATTTTCG 2777
Query 16598 TTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCG 16657
|| ||||| || ||||| || ||||| || |||| | | | ||| || | | |||
Sbjct 2778 TTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCA 2837
Query 16658 TCAGATGTAAGAATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTC 16717
|| | ||| | | |||||| | | ||| || | || ||| || || || ||||
Sbjct 2838 CCATCATTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTC 2897
Query 16718 CAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAAT 16777
||||| ||| || || || ||||| | | |||||| |||| |||||||| || |
Sbjct 2898 CAAAAAGAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATC 2957
Query 16778 ACGACGTATCT 16788
||||| ||||
Sbjct 2958 ACGACAAATCT 2968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511222037866120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |