Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 217 2e-51
seq4951 116 4e-21
>seq4589
Length=3505
Score = 217 bits (240), Expect = 2e-51
Identities = 486/723 (67%), Gaps = 15/723 (2%)
Strand=Plus/Plus
Query 24005 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 24064
||||||||| || ||||| | || || | || | || || ||||| ||| ||
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 24065 GACCGCGTCTGTTATAATAGATCTTAC--TGTTTCTTCACTCGGTGGAT--ACAATAAAT 24120
||| || || || ||||| || ||| | ||||| | | ||| || ||||| |
Sbjct 2312 GACGGCCTCCGTCATAATG--TCATACACTCTTTCTGCTGTAGGTTTATTGACAATG--T 2367
Query 24121 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 24180
| || || || | ||| || || ||| ||| || || || || | ||| || | ||||
Sbjct 2368 GCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGT 2427
Query 24181 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATG 24240
| || || || || ||||| || |||||||| || |||||||| || || ||||| |
Sbjct 2428 TACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACG 2487
Query 24241 ATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGG 24300
| || || ||||||| || || | || || || || | | | || | || |
Sbjct 2488 AACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATG 2547
Query 24301 CGCTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTG 24357
| || | || |||||||| | |||||||| |||||||| || || |||| |
Sbjct 2548 CCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCG 2607
Query 24358 TCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCA 24417
| | || || ||||| | | | | || || || ||||||||||| ||||
Sbjct 2608 TTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCA 2667
Query 24418 AAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATC 24477
|||| ||||||||| ||||||||||| |||| ||||| ||| | ||| || ||||| |
Sbjct 2668 GAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAAC 2727
Query 24478 TAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC--TGCTAAATTTTCATTCACTAT 24535
|||||| | || || ||||| ||||||| ||| | ||||||||| || || ||
Sbjct 2728 GAGCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGAT 2785
Query 24536 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGT 24595
|| ||||| |||||||| || |||| |||| ||||| | | ||| | |
Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845
Query 24596 TAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655
|| || | |||||| | | ||| || | || ||| || || || || |||||||| ||
Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905
Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
|| | || || ||||| | | ||| |||||||||||||| ||||| | | |||||
Sbjct 2906 AGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAA 2965
Query 24716 TCT 24718
|||
Sbjct 2966 TCT 2968
>seq4951
Length=3275
Score = 116 bits (128), Expect = 4e-21
Identities = 256/382 (67%), Gaps = 4/382 (1%)
Strand=Plus/Plus
Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094
||||| || ||||| || |||||||| || | || |||||||| | | | |||||
Sbjct 1779 TTCATGAACAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCA 1838
Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154
|| || ||||| | || | || || | ||| | |||||| || || | |
Sbjct 1839 GCGCCAGTGTTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGG 1898
Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214
|| | | | | ||||| |||||||| || || || |||| || | ||| ||| |
Sbjct 1899 TAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTG 1958
Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274
|| | |||| || ||| || | || |||||| || | |||||||| |||| ||| |
Sbjct 1959 TTGAAGACTCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAAC 2018
Query 54275 CTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAGAGA 54332
| || | |||||| | || |||| |||| ||||| || || |||| ||||
Sbjct 2019 GTGCCCTTACTCCGAATACAATGAACATTGA--GACCGATCCCACCCGCACTTTTGGAGA 2076
Query 54333 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 54392
| | || || |||| | ||| || || |||||||| ||||| |||||| |||| | |
Sbjct 2077 TAAGGGCACACTGTTTGAGCGTGTCGTATATGCCCTCAATACTGTCATCCTTCATCGTGA 2136
Query 54393 GTAGAAAACAGCTAGACATTTG 54414
| ||| ||||||||||| ||
Sbjct 2137 CCAAAAAGCAGCTAGACATCTG 2158
Score = 116 bits (128), Expect = 4e-21
Identities = 178/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 54308 CCTATCCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 54367
|| ||||| || || |||| ||||| | || || |||| | ||| || || ||||||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 54368 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 54427
|| ||||| |||||| |||| | | | ||| ||||||||||| || | | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 54428 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 54487
|| || ||||| | || || || || || | ||||| ||| |||| | ||||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 54488 GTCTCGATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 54547
||||| || || | || | || ||||| |||| | ||| ||||| ||||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 54548 TGCTGAGGTCTTTC 54561
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593498279041680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |