Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 154 2e-32
seq2251 136 4e-27
seq210 114 1e-20
>seq4589
Length=3505
Score = 154 bits (170), Expect = 2e-32
Identities = 391/591 (66%), Gaps = 8/591 (1%)
Strand=Plus/Minus
Query 116618 CCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACC 116677
|| |||||||| | ||||| ||| | || || || || | || || || |||||
Sbjct 2953 CCAATACAATATCATGACATTTGGGAGTTCTATAAGAAAGCTGTCGCTTCTTTTTGGACG 2894
Query 116678 GTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAG 116737
|| |||||||| || | | ||||| | ||| ||||| | || || ||
Sbjct 2893 GTTGAGGAGGTTGATTTAGCGAAGGATCTTACCGATTGGGAAAATCTCAATGATGGTGAA 2834
Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797
|| || || || | | || |||||||| || || || || || |||||||| |||||
Sbjct 2833 CGACACTTTATTTCGTATGTTCTGGCCTTCTTTGCAGCGAGTGATGGCATCGTTAACGAA 2774
Query 116798 AATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGC 116857
||| | | | ||| | | || || || || | ||||| || || || || ||
Sbjct 2773 AATTTAACCTTGAATTTTTGTAACGAAGTTCAAGTTCCTGAGGCTCGTTGTTTTTATGGA 2714
Query 116858 TTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
| || | ||| | |||||| | || || ||||||||||| || ||||| || ||
Sbjct 2713 ATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATGTATTCTCTTCTGATCGATACATAT 2654
Query 116918 GT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGC 116974
|| | | | | ||| | | ||| || |||||||| | ||| |||| |||
Sbjct 2653 GTCAAGGACCCGGCAGAGCGTGATTT---TTTATTTAACGCCATTCAAACGCTGCCATGC 2597
Query 116975 GTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGC 117034
||| ||||||| || ||||| || |||||||| | ||||| | | | ||
Sbjct 2596 GTCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATA-AGAGGGCATCGTACGC 2538
Query 117035 -GAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093
||||| ||||||| ||||| || | ||||| || ||||| || || || || |
Sbjct 2537 TGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTTCTCCGGTTCGTTTGCTTC 2478
Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153
|| |||||||||||||| || || |||||||| || || || ||||| |||||||| ||
Sbjct 2477 TATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAACGAGCTGAT 2418
Query 117154 CTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204
| | || || || || || ||||||||| ||| | | ||||||||
Sbjct 2417 CAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCTAATTTTCAAGCA 2367
>seq2251
Length=6394
Score = 136 bits (150), Expect = 4e-27
Identities = 162/217 (75%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
||||||||||| || || ||||| || || || ||||||||||| | || || || |
Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
| |||| | | |||| |||| | ||||||| ||||| |||||||| || | ||
Sbjct 1061 AGCGACTCTATTGAGAACG-TCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||||||||| |||| || ||||| ||| |||| || | ||| || ||| ||||||
Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902
|||||| || ||||| | ||||| ||||| || |||
Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTG 1216
>seq210
Length=64943
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| ||||| ||||| || || ||||| || || ||| | || || || | |
Sbjct 42172 ATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAGT 42231
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | |||| || |||| ||||| |||||||| || |||||||
Sbjct 42232 GATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAA 42291
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
||||| ||||||| || || |||||| |||| |||| ||||| || |||||||||
Sbjct 42292 CAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAAC 42351
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|| || |||||| | || || ||| | ||| |||| ||| | || |||
Sbjct 42352 ATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGGC 42399
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || ||||| ||||| || || || ||| | || || || | |
Sbjct 30598 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 30539
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | | | |||| || |||| ||||| |||||||| || ||||||||
Sbjct 30538 GACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 30479
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | ||||| || |||||||| || | ||||| || |||||||||
Sbjct 30478 CAGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAAC 30419
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || |||||| | || |||||||| |||
Sbjct 30418 ATTCAAAAGGAGTCAACTCTGCATCTTGTG 30389
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || ||||| || ||||| || || ||| | || || || | |
Sbjct 39482 ATGCAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39541
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | | | |||| ||||| | ||||| |||||||| || ||||||||
Sbjct 39542 GACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAG 39601
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | || | ||||| || ||| |||| || | ||||| || |||||||||
Sbjct 39602 CAGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39661
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || |||||| | || || ||| | |||
Sbjct 39662 ATACAAAAGGAGTCGACTCTTCATTTGGTG 39691
Score = 91.5 bits (100), Expect = 2e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||||||||| || || ||||| || ||||| || || || | || || || |||
Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| || |||| ||||| ||||||||||| |||| |||
Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 39829
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || || ||| |||| || | ||||| || |||||||||
Sbjct 39830 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39889
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || ||||| | || || ||| | |||
Sbjct 39890 ATACAAAAGGAATCGACCCTTCATTTGGTG 39919
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
|||||||| || || || ||||| ||||| || || || || | || || || |||
Sbjct 31054 ATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCCAGT 30995
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | | |||| || |||| ||||| ||||||||||| |||| |||
Sbjct 30994 GATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 30935
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || | |||| ||| || || ||| |||| || | ||||| || |||||||||
Sbjct 30934 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 30875
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899
|| || ||||| | || || ||| | |||
Sbjct 30874 ATACAAAAGGAATCGACCCTTCATTTGGTG 30845
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515025406738160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |