Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq4589 154 2e-32 seq2251 136 4e-27 seq210 114 1e-20 >seq4589 Length=3505 Score = 154 bits (170), Expect = 2e-32 Identities = 391/591 (66%), Gaps = 8/591 (1%) Strand=Plus/Minus Query 116618 CCCATACAATACCCGGACATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACC 116677 || |||||||| | ||||| ||| | || || || || | || || || ||||| Sbjct 2953 CCAATACAATATCATGACATTTGGGAGTTCTATAAGAAAGCTGTCGCTTCTTTTTGGACG 2894 Query 116678 GTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGCTTGAACGACAACGAG 116737 || |||||||| || | | ||||| | ||| ||||| | || || || Sbjct 2893 GTTGAGGAGGTTGATTTAGCGAAGGATCTTACCGATTGGGAAAATCTCAATGATGGTGAA 2834 Query 116738 CGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAG 116797 || || || || | | || |||||||| || || || || || |||||||| ||||| Sbjct 2833 CGACACTTTATTTCGTATGTTCTGGCCTTCTTTGCAGCGAGTGATGGCATCGTTAACGAA 2774 Query 116798 AATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGC 116857 ||| | | | ||| | | || || || || | ||||| || || || || || Sbjct 2773 AATTTAACCTTGAATTTTTGTAACGAAGTTCAAGTTCCTGAGGCTCGTTGTTTTTATGGA 2714 Query 116858 TTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 | || | ||| | |||||| | || || ||||||||||| || ||||| || || Sbjct 2713 ATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATGTATTCTCTTCTGATCGATACATAT 2654 Query 116918 GT---GCGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGC 116974 || | | | | ||| | | ||| || |||||||| | ||| |||| ||| Sbjct 2653 GTCAAGGACCCGGCAGAGCGTGATTT---TTTATTTAACGCCATTCAAACGCTGCCATGC 2597 Query 116975 GTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGC 117034 ||| ||||||| || ||||| || |||||||| | ||||| | | | || Sbjct 2596 GTCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATA-AGAGGGCATCGTACGC 2538 Query 117035 -GAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGC 117093 ||||| ||||||| ||||| || | ||||| || ||||| || || || || | Sbjct 2537 TGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTTCTCCGGTTCGTTTGCTTC 2478 Query 117094 CATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCAT 117153 || |||||||||||||| || || |||||||| || || || ||||| |||||||| || Sbjct 2477 TATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAACGAGCTGAT 2418 Query 117154 CTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCA 117204 | | || || || || || ||||||||| ||| | | |||||||| Sbjct 2417 CAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCTAATTTTCAAGCA 2367 >seq2251 Length=6394 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| || || ||||| || || || ||||||||||| | || || || | Sbjct 1001 AAAATGCAAATTTTTGTTAAAACCCTTACTGGGAAAACCATCACTCTTGAGGTTGAGCCT 1060 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 | |||| | | |||| |||| | ||||||| ||||| |||||||| || | || Sbjct 1061 AGCGACTCTATTGAGAACG-TCAAAGCGAAAATTCAAGACAAGGAGGGCATACCACCAGA 1119 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||||||||| |||| || ||||| ||| |||| || | ||| || ||| |||||| Sbjct 1120 CCAGCAACGACTTATCTTTGCCGGCAAGCAGTTGGAGGATGGGCGAACTCTCTCCGACTA 1179 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||| || ||||| | ||||| ||||| || ||| Sbjct 1180 CAACATTCAAAAGGAATCGACGCTCCATCTTGTTTTG 1216 >seq210 Length=64943 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| ||||| || || ||||| || || ||| | || || || | | Sbjct 42172 ATGCAAATCTTCGTCAAAACTCTTACTGGCAAGACGATTACCCTGGAGGTGGAGCCGAGT 42231 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | |||| || |||| ||||| |||||||| || ||||||| Sbjct 42232 GATTCGATAGAGAATGTGAAGGCGAAGATTCAGGACAAGGAGGGCATTCCACCGGACCAA 42291 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| || || |||||| |||| |||| ||||| || ||||||||| Sbjct 42292 CAACGTCTCATCTTTGCTGGTAAACAGTTGGAGGACGGTCGCACTCTGTCGGACTACAAC 42351 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 || || |||||| | || || ||| | ||| |||| ||| | || ||| Sbjct 42352 ATTCAAAAGGAGTCAACCCTTCATTTGGTGCTGCGTTTGCGAGGTGGC 42399 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || ||||| ||||| || || || ||| | || || || | | Sbjct 30598 ATGCAAATATTTGTGAAGACGCTTACGGGGAAGACTATTACCTTGGAGGTGGAGCCGAGT 30539 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | |||| || |||| ||||| |||||||| || |||||||| Sbjct 30538 GACTCGATAGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATTCCACCGGACCAG 30479 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||||| || |||||||| || | ||||| || ||||||||| Sbjct 30478 CAGCGTTTGATATTTGCGGGTAAGCAGCTGGAAGATGGTCGCACTCTGTCTGACTACAAC 30419 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || |||||| | || |||||||| ||| Sbjct 30418 ATTCAAAAGGAGTCAACTCTGCATCTTGTG 30389 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || ||||| || ||||| || || ||| | || || || | | Sbjct 39482 ATGCAAATATTTGTGAAGACGCTGACTGGCAAGACGATTACCTTGGAGGTGGAGCCAAGT 39541 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | |||| ||||| | ||||| |||||||| || |||||||| Sbjct 39542 GACTCGATAGAGAATGTGAAGGCGAAAATCCAAGACAAGGAGGGCATTCCACCGGACCAG 39601 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||||| || ||| |||| || | ||||| || ||||||||| Sbjct 39602 CAGCGTTTGATATTTGCGGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39661 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || |||||| | || || ||| | ||| Sbjct 39662 ATACAAAAGGAGTCGACTCTTCATTTGGTG 39691 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||||||||| || || ||||| || ||||| || || || | || || || ||| Sbjct 39710 ATGCAAATATTTGTGAAGACGCTAACTGGCAAGACAATTACACTGGAGGTGGAGCCCAGT 39769 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || |||| ||||| ||||||||||| |||| ||| Sbjct 39770 GATTCCATTGAGAATGTGAAGGCGAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 39829 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 39830 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 39889 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || ||||| | || || ||| | ||| Sbjct 39890 ATACAAAAGGAATCGACCCTTCATTTGGTG 39919 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || ||||| ||||| || || || || | || || || ||| Sbjct 31054 ATGCAAATCTTTGTGAAGACGCTAACGGGGAAGACTATTACTCTGGAAGTTGAGCCCAGT 30995 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || |||| ||||| ||||||||||| |||| ||| Sbjct 30994 GATTCCATTGAGAATGTAAAGGCTAAGATTCAAGACAAGGAGGGCATCCCGCCGGATCAG 30935 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | |||| ||| || || ||| |||| || | ||||| || ||||||||| Sbjct 30934 CAGCGTTTAATCTTCGCCGGTAAGCAGTTGGAAGATGGTCGCACTCTGTCCGACTACAAT 30875 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || || ||||| | || || ||| | ||| Sbjct 30874 ATACAAAAGGAATCGACCCTTCATTTGGTG 30845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515025406738160