Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq210 123 3e-23 seq2251 118 1e-21 seq30086 109 6e-19 seq10174 89.7 6e-13 >seq210 Length=64943 Score = 123 bits (136), Expect = 3e-23 Identities = 159/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 42968 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 43027 ||| | ||| | ||||| || |||||||||||| ||||| |||| |||||| || | Sbjct 30383 ACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACC 30442 Query 43028 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTT 43087 || || ||||||||||| || ||||| | ||||||||||| | || | || |||||| Sbjct 30443 ATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTT 30502 Query 43088 GTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 43146 || | ||| | || | || | || | | || ||| |||| ||||| || | || | Sbjct 30503 GT-CTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAA 30561 Query 43147 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | || || ||||| |||||||| ||||| |||||||| Sbjct 30562 TAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || |||| ||||||| ||||||||| | || |||||||||||| ||||| || | | Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| || |||| || | ||| |||||||| || ||||| || || ||||| | || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | || |||||||||| ||| | || | || | || | | || || |||| ||||| Sbjct 42278 ATGCCCTCCTTGTCC-TGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | || || || ||||| || || || || || ||||||||||| Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | || ||||||||| |||||||| || | |||||| || | || || Sbjct 39691 CACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39632 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| || ||||| | ||||||||||| | || | || ||||||||| Sbjct 39631 CAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39572 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 |||||| || | || | | || ||| || | ||||| || | || || || || Sbjct 39571 GATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 39512 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || |||||||| ||||| |||||||| Sbjct 39511 GCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 30617 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 30676 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| ||||| || | ||||| ||||| | || | || ||||||||| Sbjct 30677 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 30736 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 30737 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 30796 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | |||||| ||||| |||||||| Sbjct 30797 GCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||||||||| || ||| |||||||| ||||| |||| |||||| || | || || Sbjct 39463 CACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTC 39404 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | |||||| || || || || | ||||| ||||| | || | || ||||||||| Sbjct 39403 CAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39344 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 39343 GATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTT 39284 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||||| | ||| || |||||||||||||| Sbjct 39283 GCCCGTCAACGTTTTCACAAAGATTTGCAT 39254 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 40147 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 40088 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| ||||| || | ||||| ||||| | || | || ||||||||| Sbjct 40087 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 40028 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 40027 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 39968 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | |||||| ||||| |||||||| Sbjct 39967 GCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 104 bits (114), Expect = 3e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | || |||||||| |||||||| || | |||||| || | || || Sbjct 30845 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 30904 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| ||||| || | |||||||| || | ||| | || ||||||||| | Sbjct 30905 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT-T 30963 Query 43094 GATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | || | || | | | || || | || || || | || || || | Sbjct 30964 GAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCT 31023 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 | |||||||||||||| |||||||||||||| Sbjct 31024 TCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054 Score = 104 bits (114), Expect = 3e-17 Identities = 151/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 ||||||||| | || |||||||| |||||||| || | |||||| || | || || Sbjct 39919 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTC 39860 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| ||||| || | |||||||| || | ||| | || ||||||||| | Sbjct 39859 CAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCT-T 39801 Query 43094 GATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTT 43152 || | || | || | || | | | || || | ||||| || | || || || | Sbjct 39800 GAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCT 39741 Query 43153 TGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 |||| ||||||||||| ||||| |||||||| Sbjct 39740 TGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710 Score = 93.3 bits (102), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 43002 ATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGC 43061 |||||||| |||| || || || | || || | ||||||||| ||||| || | ||| Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288 Query 43062 TGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGT 43120 |||||||| | || | || |||||||| | ||| | || | || | || | | || Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGT-CTTGAATCTTCGCCTTCACATTCTCTATCGA 40229 Query 43121 GTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTG 43180 ||| |||| ||||| || | || || || || ||||| |||||||| ||||| ||||| Sbjct 40228 GTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTG 40169 Query 43181 CAT 43183 ||| Sbjct 40168 CAT 40166 >seq2251 Length=6394 Score = 118 bits (130), Expect = 1e-21 Identities = 167/232 (72%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 |||||||| || | ||| || | ||| | || ||||||||||| ||||| || | Sbjct 1231 TCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 1172 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| ||| | || || | |||||| || || || || ||||| |||||||| | || Sbjct 1171 GAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 1112 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | || ||||||||| ||| |||| | ||||| || | | | |||||| | || | Sbjct 1111 TATGCCCTCCTTGTCT-TGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAA 1053 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 | || | ||||||||||| || || || || || ||||| ||||||||||| Sbjct 1052 CCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq30086 Length=500 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 42974 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 43033 |||||||||||| || ||||||||| |||||||| |||| || || || | || || Sbjct 147 CACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTGCGTCCATCTTC 206 Query 43034 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 43093 | ||||||||| ||||| || | ||||| ||||| | || | || ||||||||| Sbjct 207 CAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 266 Query 43094 GATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 ||| || || | || | | || ||| || | ||||| || | || || || || Sbjct 267 GATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTT 326 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || | |||||| ||||| |||||||| Sbjct 327 GCCAGTCAACGTCTTCACAAATATTTGCAT 356 >seq10174 Length=1708 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||||||||| || | || | |||| | || |||| ||||| ||||| || Sbjct 1076 CTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAA 1135 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||||| | ||| |||||| || | Sbjct 1136 AATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGT-CTTGAATTTTTGCCTTCACAT 1194 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | | ||| | ||| || || | |||||||| ||||| || || || || | Sbjct 1195 TCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGA 1254 Query 43171 CAAAGATTTGCAT 43183 |||| || ||||| Sbjct 1255 CAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571602517957480