Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq10174 107 1e-18 seq210 105 4e-18 seq2251 91.5 1e-13 seq30086 89.7 3e-13 >seq10174 Length=1708 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| || ||||||||||||| || | || || || |||||||| || ||| Sbjct 1077 TCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTAATTGCTTGCCAGCAAAA 1136 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | | ||||||||| || ||| ||| | || Sbjct 1137 ATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAATTTTTGCCTTCACATTC 1196 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || || || | | ||| || || | |||||||| ||||||||||||||||| ||| Sbjct 1197 TCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGCCGGTGAGAGTTTTGACA 1256 Query 34379 AAGATCTGCATC 34390 || ||||||||| Sbjct 1257 AAAATCTGCATC 1268 >seq210 Length=64943 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || ||||| ||||| || ||||||||||| ||||| ||| | || Sbjct 39465 AGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCT 39406 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| ||||| || || | ||||| ||||| || | || ||||||||| Sbjct 39405 TCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCT 39346 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | ||||| || | | || || |||| || || || Sbjct 39345 TGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTC 39286 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 ||||| || | |||||||||||||| |||||| Sbjct 39285 TTGCCCGTCAACGTTTTCACAAAGATTTGCATC 39253 Score = 105 bits (116), Expect = 4e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || |||| | |||||||| || | || || || || ||||||||||| ||| Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||||||| || || || || ||||| || || ||||| || Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || |||||||||| ||| || || Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATC 34390 |||| || || || ||||| || |||||||| || ||||| |||||| Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCATC 42171 Score = 98.7 bits (108), Expect = 6e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || ||||| |||||||||||||| || | || ||||||||||| || ||||| Sbjct 30863 TTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAA 30922 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 || | |||||||| | || |||| | || ||||||||| ||||| ||||| || Sbjct 30923 GATTAAACGCTGCTGATCCGGCGGG-ATGCCCTCCTTGTCTTGAATCTTAGCCTTTACAT 30981 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || ||||| | | || || |||| || || || || || || || || |||| Sbjct 30982 TCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCTTCCCCGTTAGCGTCTTCA 31041 Query 34377 CAAAGATCTGCAT 34389 ||||||| ||||| Sbjct 31042 CAAAGATTTGCAT 31054 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| || ||||| |||||||||||||| || | || ||||||||||| || ||||| Sbjct 39901 TTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCCAACTGCTTACCGGCGAA 39842 Query 34258 AATGAGCCGCTGCTGGT-CGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGAT 34316 || | |||||||| | || |||| | || ||||||||| ||||| ||| | || Sbjct 39841 GATTAAACGCTGCTGATCCGGCGGG-ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACAT 39783 Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376 | || ||||| | | || || |||| || || || ||||| || || || |||| Sbjct 39782 TCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCTTGCCAGTTAGCGTCTTCA 39723 Query 34377 CAAAGATCTGCAT 34389 |||| || ||||| Sbjct 39722 CAAATATTTGCAT 39710 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||||| || || | ||| || || || ||||||||||| ||| Sbjct 30372 CCGCCACGAAGACGAAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGAC 30431 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || |||| |||||| || || || || | ||||||||||| || Sbjct 30432 AGAGTGCGACCATCTTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGA 30491 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || ||||||| || ||| || || Sbjct 30492 ATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACC 30551 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || || || || || || || || |||||||| || ||||| Sbjct 30552 TCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236 ||||||| || ||||| || || ||||| |||||||| |||| | || || | || Sbjct 30615 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTG-CGTCCATC 30673 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 ||||||||||| || ||||| || | ||||| ||||| || | || ||||||||| Sbjct 30674 TTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 30733 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || ||||||| || | | || || |||| || || || Sbjct 30734 TTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGT 30793 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || | || |||||||| || ||||| Sbjct 30794 CTTGCCAGTCAACGTCTTCACAAATATTTGCAT 30826 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| || | ||| || || ||||| |||||||||||||| || | || Sbjct 39693 AGCACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCT 39634 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||||||||| || || || || | ||||||||||| || | || ||||||||| Sbjct 39633 TCCAACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCT 39574 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 || || ||| | || ||||||| || | | || || |||| || || || Sbjct 39573 TGGATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTC 39514 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || || |||||||| || ||||| Sbjct 39513 TTGCCAGTCAGCGTCTTCACAAATATTTGCAT 39482 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236 ||||||| || ||||| || || ||||| |||||||| |||| | || || | || Sbjct 40149 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTG-CGTCCATC 40091 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 ||||||||||| || ||||| || | ||||| ||||| || | || ||||||||| Sbjct 40090 TTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 40031 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || ||||||| || | | || || |||| || || || Sbjct 40030 TTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGT 39971 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || | || |||||||| || ||||| Sbjct 39970 CTTGCCAGTCAACGTCTTCACAAATATTTGCAT 39938 Score = 84.2 bits (92), Expect = 1e-11 Identities = 130/183 (71%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 34208 ATGTTGTAGTCGGACA-GCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCG 34266 || |||||||| |||| | || || | || ||||||||||| || ||||| || | || Sbjct 40347 ATATTGTAGTCAGACAAGGTG-CGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACG 40289 Query 34267 CTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGA 34326 ||||||||| || | || ||||||||| ||||| ||| | || ||||||| Sbjct 40288 CTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGA 40229 Query 34327 ATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTG 34386 || ||| || || |||| || || || || || || || || |||||||| || || Sbjct 40228 GTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTG 40169 Query 34387 CAT 34389 ||| Sbjct 40168 CAT 40166 >seq2251 Length=6394 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || |||| || || || | || ||| || || |||||||||||||| Sbjct 1231 TCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGGA 1172 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || || | || |||||||||||||| || || || || || |||||||| || Sbjct 1171 GAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTGG 1112 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGA 34340 | || ||||||||| || ||| ||||| | | | || || ||| | | || | Sbjct 1111 TATGCCCTCCTTGTCTTGAAT-TTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAA 1053 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||||||||| || || || ||||| ||||| || ||||| Sbjct 1052 CCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCAT 1004 >seq30086 Length=500 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACA-GCTGACGGTCGTC 34236 ||||||| || ||||| || || ||||| |||||||| |||| | || || | || Sbjct 145 AGCACCAAATGCAAAGTCGACTCCTTTTGTATATTGTAGTCAGACAAGGTG-CGTCCATC 203 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 ||||||||||| || ||||| || | ||||| ||||| || | || ||||||||| Sbjct 204 TTCCAACTGCTTACCGGCGAAGATTAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 263 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 ||||| ||| | || ||||||| || | | || || |||| || || || Sbjct 264 TTGGATCTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGT 323 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || | || |||||||| || ||||| Sbjct 324 CTTGCCAGTCAACGTCTTCACAAATATTTGCAT 356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322953518492960