Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 178 1e-39
>seq4589
Length=3505
Score = 178 bits (196), Expect = 1e-39
Identities = 383/573 (67%), Gaps = 0/573 (0%)
Strand=Plus/Plus
Query 16219 GTGTTTAAACATTATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTC 16278
||| || || |||| ||| ||||| || || | ||||| || | ||| || | |||
Sbjct 2366 GTGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTC 2425
Query 16279 GTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAA 16338
||| || |||||||| ||||| || || || || || | |||||| |||| |||||
Sbjct 2426 GTTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAA 2485
Query 16339 TGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGT 16398
||||| || ||||| | ||| |||| || || || || |||| |||||| ||||||
Sbjct 2486 CGAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGA 2545
Query 16399 TCTAtttttactttctatccattttttagcccaatttgctttttgtttAACACAGTTCAT 16458
| | ||| | | ||||| || ||||||| || || | || || ||
Sbjct 2546 TGCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAG 2605
Query 16459 GTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTAT 16518
| | || || ||||||||| ||| ||| || | ||| ||||| ||
Sbjct 2606 CGTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGAT 2665
Query 16519 TAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCA 16578
|| | | ||||||||| |||||||| ||||| | || | || | |||||||| ||
Sbjct 2666 CAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACA 2725
Query 16579 TCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTAT 16638
| ||| || | | ||| ||||| |||| | | ||| ||||||||||| ||
Sbjct 2726 ACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGAT 2785
Query 16639 TCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATCTGA 16698
||||| || |||||||| || || || | | |||||| | | ||| |||
Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845
Query 16699 AAGTTTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGA 16758
|| ||| ||| || | || ||| || | |||||| ||||| || || |||||||||||
Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905
Query 16759 AGCAACAGCCTTTTTATACATTTTCCATATGTC 16791
||| ||||| || ||||| | | ||| |||||
Sbjct 2906 AGCGACAGCTTTCTTATAGAACTCCCAAATGTC 2938
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462338031892600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |