Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq210 127 2e-24 seq10174 87.8 1e-12 >seq210 Length=64943 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || |||||| || || ||||||||| ||| |||| | || ||| Sbjct 39690 ACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 39631 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || || || |||||||| ||||| ||||| || || | ||||||||||| Sbjct 39630 AACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGG 39571 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| ||| || | | | ||| | ||||||||||| ||||||||||||| Sbjct 39570 ATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTG 39511 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || ||||| ||||||||||| ||||||||| Sbjct 39510 CCAGTCAGCGTCTTCACAAATATTTGCATG 39481 Score = 125 bits (138), Expect = 6e-24 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| ||||| || |||||| |||||||||||||| ||| |||| | || |||| Sbjct 30391 CAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATCTTCCA 30450 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 | || || || || |||||||| ||||| ||||| || || | ||||||||||| || Sbjct 30451 GCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAA 30510 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || ||| || | | | ||| | ||||||||||| |||||| ||||| | Sbjct 30511 TCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCTTCC 30570 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||| || ||||||||||| ||||||||| Sbjct 30571 CCGTAAGCGTCTTCACAAATATTTGCATG 30599 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||||| ||| | | ||||| || || || |||||| |||||||||||||| Sbjct 42399 GCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGA 42340 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 ||| |||| |||| |||| ||||| || || || || | || |||||||| || || Sbjct 42339 CAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGG 42280 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | |||||||||||| ||| || ||| || | | | || | |||||| Sbjct 42279 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||||| ||||||||||||||| || ||||| || || ||||||||||| Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||| || || ||||||||| ||| |||| | || ||| Sbjct 39918 ACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 39859 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| || || ||||| || || || || | ||||||||||| | Sbjct 39858 AACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGA 39799 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || | ||||||||||| ||||| |||||| Sbjct 39798 ATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCTTG 39739 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 || || || ||||||||||| ||||||||| Sbjct 39738 CCAGTTAGCGTCTTCACAAATATTTGCATG 39709 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || || || ||||| || || ||||||||| ||| |||| | || ||| Sbjct 30846 ACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 30905 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | || || |||||||| || || ||||| || || || || | ||||||||||| | Sbjct 30906 AACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTTGA 30965 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||| || | | | | || | ||| || |||| ||||| ||||| Sbjct 30966 ATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCTTC 31025 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTG 45340 ||||| || ||||||||||||||||||||| || Sbjct 31026 CCCGTTAGCGTCTTCACAAAGATTTGCATGATG 31058 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45182 TCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTG 45241 || |||| || || |||||||| || || ||||| ||||| || || | ||||||||| Sbjct 40320 TCTTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTG 40261 Query 45242 TCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATC 45301 || ||| || ||| || | | | ||| | ||||||||||| |||||| Sbjct 40260 TCTTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATA 40201 Query 45302 GTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 ||||| ||||| || ||||||||||| ||||||||| Sbjct 40200 GTCTTCCCCGTAAGCGTCTTCACAAATATTTGCATG 40165 >seq10174 Length=1708 Score = 87.8 bits (96), Expect = 1e-12 Identities = 145/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 45130 CAAG-TGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 |||| || ||||| |||||||||||| ||||||||| || || | || || | Sbjct 1060 CAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTCTA 1119 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 ||| || || || || || | ||||| ||||| ||||| | |||||||||||| || Sbjct 1120 ATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTGAA 1179 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 ||||| ||| || | | | ||| | || ||||| | ||| || ||||||| Sbjct 1180 TTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTTGC 1239 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || ||||| || ||||| || ||||| Sbjct 1240 CGGTGAGAGTTTTGACAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394930312466911