Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 206 3e-48
>seq4589
Length=3505
Score = 206 bits (228), Expect = 3e-48
Identities = 412/606 (68%), Gaps = 6/606 (1%)
Strand=Plus/Plus
Query 14189 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 14248
|| || ||||||| ||||||||| || |||||||| ||||| | ||| || || |||
Sbjct 2367 TGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCG 2426
Query 14249 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 14308
|| || || | || ||||| | || || || || | |||||| || | ||| ||
Sbjct 2427 TTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAAC 2486
Query 14309 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14368
|| ||||| ||||| | ||||||| ||||| || || | | || || | |||||
Sbjct 2487 GAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGAT 2546
Query 14369 GCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 14428
|| | || |||| ||||| || ||||| || | || || | | ||
Sbjct 2547 GCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGC 2606
Query 14429 GTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 14486
|||| ||| || ||||||||| || |||| | | ||||| || ||||||| |
Sbjct 2607 GTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACAT--ATGTATCGA 2664
Query 14487 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAAC 14546
| || | |||||||||||| || ||||| || | || | || | ||||||||||
Sbjct 2665 TCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAAC 2724
Query 14547 ATCTAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACT 14605
| | ||| || | ||| || || | | ||||| | || |||||||| |||||
Sbjct 2725 AACGAGCCTCAGGAACTTGAACTTCGTTACAAAAAT-TCAAGGTTAAATTTTCGTTAACG 2783
Query 14606 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665
|| |||||||| |||||||| || |||| | | |||||||| | | || |||
Sbjct 2784 ATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCA 2843
Query 14666 CTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725
|||| |||| |||||||| | |||||| | | ||| || || ||||| |||||||||
Sbjct 2844 TTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAA 2903
Query 14726 CTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACA 14785
||| |||||||| ||||| | |||| || || | |||| ||| || | || |||
Sbjct 2904 GAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACA 2963
Query 14786 AATCTT 14791
||||||
Sbjct 2964 AATCTT 2969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482164171731880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |