Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq4589 206 3e-48 >seq4589 Length=3505 Score = 206 bits (228), Expect = 3e-48 Identities = 412/606 (68%), Gaps = 6/606 (1%) Strand=Plus/Plus Query 14189 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 14248 || || ||||||| ||||||||| || |||||||| ||||| | ||| || || ||| Sbjct 2367 TGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCG 2426 Query 14249 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 14308 || || || | || ||||| | || || || || | |||||| || | ||| || Sbjct 2427 TTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAAC 2486 Query 14309 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGAT 14368 || ||||| ||||| | ||||||| ||||| || || | | || || | ||||| Sbjct 2487 GAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGAT 2546 Query 14369 GCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 14428 || | || |||| ||||| || ||||| || | || || | | || Sbjct 2547 GCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGC 2606 Query 14429 GTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 14486 |||| ||| || ||||||||| || |||| | | ||||| || ||||||| | Sbjct 2607 GTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACAT--ATGTATCGA 2664 Query 14487 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAAC 14546 | || | |||||||||||| || ||||| || | || | || | |||||||||| Sbjct 2665 TCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAAC 2724 Query 14547 ATCTAGCTTCTGACCATTGTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACT 14605 | | ||| || | ||| || || | | ||||| | || |||||||| ||||| Sbjct 2725 AACGAGCCTCAGGAACTTGAACTTCGTTACAAAAAT-TCAAGGTTAAATTTTCGTTAACG 2783 Query 14606 ATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTG 14665 || |||||||| |||||||| || |||| | | |||||||| | | || ||| Sbjct 2784 ATGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCA 2843 Query 14666 CTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAA 14725 |||| |||| |||||||| | |||||| | | ||| || || ||||| ||||||||| Sbjct 2844 TTGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAA 2903 Query 14726 CTAGCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACA 14785 ||| |||||||| ||||| | |||| || || | |||| ||| || | || ||| Sbjct 2904 GAAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACA 2963 Query 14786 AATCTT 14791 |||||| Sbjct 2964 AATCTT 2969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482164171731880