Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 219 6e-52
seq4951 116 5e-21
>seq4589
Length=3505
Score = 219 bits (242), Expect = 6e-52
Identities = 486/722 (67%), Gaps = 13/722 (2%)
Strand=Plus/Plus
Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087
||||||||| || ||||| | || || | || | || || ||||| ||| ||
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 36088 GACCGCGTCTGTTATAATAG-ATATTACTGTTTCTTCACTCGGTGGAT--ACAATAAATG 36144
||| || || || ||||| ||| ||| ||||| | | ||| || ||||| ||
Sbjct 2312 GACGGCCTCCGTCATAATGTCATAC-ACTCTTTCTGCTGTAGGTTTATTGACAATG--TG 2368
Query 36145 TTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTT 36204
|| || || | ||| || || ||| ||| || || || || | ||| || | |||||
Sbjct 2369 CTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTT 2428
Query 36205 GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGA 36264
|| || || || ||||| || |||||||| || |||||||| || || ||||| ||
Sbjct 2429 ACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGA 2488
Query 36265 TCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC 36324
|| || ||||||| || || | || || || || | | | ||| | || ||
Sbjct 2489 ACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGC 2548
Query 36325 ACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGT 36381
|| | || |||||||| | |||||||| |||||||| || || |||| ||
Sbjct 2549 CCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGT 2608
Query 36382 CTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAA 36441
| || || ||||| | | | | || || || ||||||||||| ||||
Sbjct 2609 TTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAG 2668
Query 36442 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCT 36501
|||| ||||||||| ||||||||||| |||| ||||| ||| | ||| || ||||| |
Sbjct 2669 AAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACG 2728
Query 36502 AGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC--TGCTAAATTTTCATTCACTATT 36559
|||||| | || || ||||| ||||||| ||| | ||||||||| || || ||
Sbjct 2729 AGCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATG 2786
Query 36560 CCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTT 36619
|| ||||| |||||||| || |||| |||| ||||| | | ||| |
Sbjct 2787 CCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTG 2846
Query 36620 AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT 36679
|| || | |||||| | | ||| || | || ||| || || || || |||||||| ||
Sbjct 2847 AGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAA 2906
Query 36680 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAAT 36739
|| | || || ||||| | | ||| |||||||||||||| ||||| | | ||||||
Sbjct 2907 GCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAAT 2966
Query 36740 CT 36741
||
Sbjct 2967 CT 2968
>seq4951
Length=3275
Score = 116 bits (128), Expect = 5e-21
Identities = 178/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 66339 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 66398
|| || || || || |||| ||||| | || || |||| | ||| || || ||||||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 66399 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 66458
|| ||||| |||||| |||| | | | ||| ||||||||||| || | | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 66459 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTAC 66518
|| || ||||| | || || || || || | ||||| ||| |||| | ||||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 66519 GTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATG 66578
|||||||| || | || | || ||||| |||| | ||| ||||| ||||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 66579 TGCTGAGGTCTTTC 66592
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 107 bits (118), Expect = 3e-18
Identities = 308/469 (66%), Gaps = 6/469 (1%)
Strand=Plus/Plus
Query 65980 GTTCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACG 66039
||||||| || || ||||| || | | ||||| ||||||| ||| ||| || |
Sbjct 1693 GTTCGAAATCCTCCCCCCAGCAATCAGCAAGACCAGGGCATTCATGGGGATCCATAAAGG 1752
Query 66040 ACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAA 66099
||| || || | || | ||||| || ||||| || |||||||| || | |
Sbjct 1753 TCCATGAACCACCAGTTTCAACCCTCTTCATGAACAGATCGGGGATCCAAAGCGCGAGGA 1812
Query 66100 ATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCA 66159
| | |||||| | | | ||||| || || ||||| | || | || ||
Sbjct 1813 AAAGATCTCTTGCACGAATCTCCTCAGCGCCAGTGTTCTTCCGCAATTCCACAAATTGCA 1872
Query 66160 TAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTC 66219
| ||| |||||| || || | ||| | || | | ||||| |||||||| || |
Sbjct 1873 GTACATCTGGATGCCATGGCTCAAGGTAGACAGCGAAGGCGCCAGGTCGTTTGTTCCCAC 1932
Query 66220 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 66279
| || |||| || | ||| ||| | || | |||| || ||| || | || |||||| |
Sbjct 1933 CTTGGTCTACATAACGAGCAGTGCTGTTGAAGACTCGCAGCATCGGTACAAGACCATTCG 1992
Query 66280 ATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCAC-GAATATTACTAA--TTGATA 66336
| |||||||| |||| ||| | | || ||| | | ||||| | || ||||
Sbjct 1993 ACTCCCCATTGGTGCCGGCGATGAACGTGCC-CTTACTCCGAATACAATGAACATTGA-- 2049
Query 66337 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 66396
|||| || || || || |||| ||||| | || || |||| | ||| || || ||||
Sbjct 2050 GACCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGC 2109
Query 66397 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG 66445
|||| ||||| |||||| |||| | | | ||| ||||||||||| ||
Sbjct 2110 CCTCAATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTG 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657925236528440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |