Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 237 2e-57
seq4951 116 5e-21
>seq4589
Length=3505
Score = 237 bits (262), Expect = 2e-57
Identities = 504/747 (67%), Gaps = 9/747 (1%)
Strand=Plus/Plus
Query 49830 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 49889
||||||||| || ||||| | || || | || | || || ||||| ||| |||
Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311
Query 49890 TACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTT 49948
|| || || || ||||| | || || ||||| | | ||| || | | || |
Sbjct 2312 GACGGCCTCCGTCATAAT-GTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCT 2370
Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008
| || || | ||| || || ||| ||| || || || || | ||| || || |||||
Sbjct 2371 TGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTAC 2430
Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068
|| || || || ||||| || |||||||| || |||||||| || || ||||| || |
Sbjct 2431 TGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAAC 2490
Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC 50128
| || ||||| | || || | || || || || || | | ||| | || || |
Sbjct 2491 CGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCC 2550
Query 50129 TGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185
| | || |||||||| | |||||||| |||||||| || || |||| |||||
Sbjct 2551 TCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTT 2610
Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245
||||| ||||| | | | | || || || ||||| |||||||||| ||
Sbjct 2611 GAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAA 2670
Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305
|| ||||||||| ||||||||||| |||| ||||| || | ||| || ||||| | ||
Sbjct 2671 GAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAG 2730
Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCC 50363
|||| | || || ||||| ||||||| |||| | ||||||||| || || || ||
Sbjct 2731 CCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCC 2788
Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423
||||| |||||||| || |||| |||| ||||| ||| ||| | ||
Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAG 2848
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
|| | |||||| | | ||| || | || ||| || || || || |||||||| || ||
Sbjct 2849 ATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGC 2908
Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543
| || || ||||| | | ||| |||||||||||||| ||||| | | ||||||||
Sbjct 2909 GACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968
Query 50544 ATTTGGATTTGGTGCAAGGATCGGTTC 50570
||||| || |||| | |||||
Sbjct 2969 TCGAGGATTGGGAACAAGTAAAGGTTC 2995
>seq4951
Length=3275
Score = 116 bits (128), Expect = 5e-21
Identities = 178/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Plus
Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277
|| || || || || |||| ||||| | || || |||| | ||| || || ||||||
Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247
Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337
|| || || ||||| |||| | | | ||| ||||||||||| || | | ||
Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307
Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397
|| || ||||| | || || || || || | ||||| ||| |||||| ||||||||||
Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367
Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457
|||||||| || | || | || ||||| |||| || ||| ||||| ||||||
Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427
Query 80458 TGCTGAGGTCTTTC 80471
| ||||||||| ||
Sbjct 2428 TACTGAGGTCTCTC 2441
Score = 114 bits (126), Expect = 2e-20
Identities = 323/494 (65%), Gaps = 4/494 (1%)
Strand=Plus/Plus
Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892
|||| |||||| | | || | | ||||||| || || ||||| ||| | | ||
Sbjct 1667 TTCTGATTCGTACTTCGAGTAAAGTTGTTCGAAATCCTCCCCCCAGCAATCAGCAAGACC 1726
Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952
||| ||||| | ||| ||| || | ||| ||| || | || | ||||| ||
Sbjct 1727 AGGGCATTCATGGGGATCCATAAAGGTCCATGAACCACCAGTTTCAACCCTCTTCATGAA 1786
Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012
||||| || |||||||| || | || |||||||| | | | |||||| || ||
Sbjct 1787 CAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCAGCGCCAGT 1846
Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072
||||| | || | || || | ||| | |||||| || || | ||| | ||
Sbjct 1847 GTTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGGTAGACAGC 1906
Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132
| | || ||||||||||| || || || |||| || | ||| ||| | || | ||
Sbjct 1907 GAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTGTTGAAGAC 1966
Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192
|| || ||| || | || |||||| || |||||||| |||| ||| | | || |
Sbjct 1967 TCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAACGTGCCCTT 2026
Query 80193 GGCACGAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250
|||||| | | |||| ||||| || || || || |||| ||||| | ||
Sbjct 2027 ACTCCGAATACAATGAACATTG--AGACCGATCCCACCCGCACTTTTGGAGATAAGGGCA 2084
Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310
|| |||| | ||| || || |||||||| || || ||||| |||| | | | |||
Sbjct 2085 CACTGTTTGAGCGTGTCGTATATGCCCTCAATACTGTCATCCTTCATCGTGACCAAAAAG 2144
Query 80311 CAGCTAGACATTTG 80324
||||||||||| ||
Sbjct 2145 CAGCTAGACATCTG 2158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 717998632169240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |