Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq4589 237 2e-57 seq4951 116 5e-21 >seq4589 Length=3505 Score = 237 bits (262), Expect = 2e-57 Identities = 504/747 (67%), Gaps = 9/747 (1%) Strand=Plus/Plus Query 49830 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGA 49889 ||||||||| || ||||| | || || | || | || || ||||| ||| ||| Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 49890 TACCGCATCTGTTATAATAGATCTA-ACGGTTTCTTCACTCGGTGGATGCAATAAATGTT 49948 || || || || ||||| | || || ||||| | | ||| || | | || | Sbjct 2312 GACGGCCTCCGTCATAAT-GTCATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCT 2370 Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008 | || || | ||| || || ||| ||| || || || || | ||| || || ||||| Sbjct 2371 TGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTAC 2430 Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068 || || || || ||||| || |||||||| || |||||||| || || ||||| || | Sbjct 2431 TGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAAC 2490 Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC 50128 | || ||||| | || || | || || || || || | | ||| | || || | Sbjct 2491 CGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCC 2550 Query 50129 TGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 | | || |||||||| | |||||||| |||||||| || || |||| ||||| Sbjct 2551 TCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTT 2610 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 ||||| ||||| | | | | || || || ||||| |||||||||| || Sbjct 2611 GAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAA 2670 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 || ||||||||| ||||||||||| |||| ||||| || | ||| || ||||| | || Sbjct 2671 GAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAG 2730 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA--GCTAAATTTTCATTCACTATTCC 50363 |||| | || || ||||| ||||||| |||| | ||||||||| || || || || Sbjct 2731 CCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGATGCC 2788 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423 ||||| |||||||| || |||| |||| ||||| ||| ||| | || Sbjct 2789 ATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAG 2848 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || | |||||| | | ||| || | || ||| || || || || |||||||| || || Sbjct 2849 ATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGC 2908 Query 50484 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | || || ||||| | | ||| |||||||||||||| ||||| | | |||||||| Sbjct 2909 GACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAATCT 2968 Query 50544 ATTTGGATTTGGTGCAAGGATCGGTTC 50570 ||||| || |||| | ||||| Sbjct 2969 TCGAGGATTGGGAACAAGTAAAGGTTC 2995 >seq4951 Length=3275 Score = 116 bits (128), Expect = 5e-21 Identities = 178/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 80218 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 80277 || || || || || |||| ||||| | || || |||| | ||| || || |||||| Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247 Query 80278 TCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 80337 || || || ||||| |||| | | | ||| ||||||||||| || | | || Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307 Query 80338 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 80397 || || ||||| | || || || || || | ||||| ||| |||||| |||||||||| Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367 Query 80398 GTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATG 80457 |||||||| || | || | || ||||| |||| || ||| ||||| |||||| Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427 Query 80458 TGCTGAGGTCTTTC 80471 | ||||||||| || Sbjct 2428 TACTGAGGTCTCTC 2441 Score = 114 bits (126), Expect = 2e-20 Identities = 323/494 (65%), Gaps = 4/494 (1%) Strand=Plus/Plus Query 79833 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCC 79892 |||| |||||| | | || | | ||||||| || || ||||| ||| | | || Sbjct 1667 TTCTGATTCGTACTTCGAGTAAAGTTGTTCGAAATCCTCCCCCCAGCAATCAGCAAGACC 1726 Query 79893 AGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAA 79952 ||| ||||| | ||| ||| || | ||| ||| || | || | ||||| || Sbjct 1727 AGGGCATTCATGGGGATCCATAAAGGTCCATGAACCACCAGTTTCAACCCTCTTCATGAA 1786 Query 79953 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 80012 ||||| || |||||||| || | || |||||||| | | | |||||| || || Sbjct 1787 CAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCAGCGCCAGT 1846 Query 80013 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 80072 ||||| | || | || || | ||| | |||||| || || | ||| | || Sbjct 1847 GTTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGGTAGACAGC 1906 Query 80073 CATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 80132 | | || ||||||||||| || || || |||| || | ||| ||| | || | || Sbjct 1907 GAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTGTTGAAGAC 1966 Query 80133 TCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACT 80192 || || ||| || | || |||||| || |||||||| |||| ||| | | || | Sbjct 1967 TCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAACGTGCCCTT 2026 Query 80193 GGCACGAATATTACTA--ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 80250 |||||| | | |||| ||||| || || || || |||| ||||| | || Sbjct 2027 ACTCCGAATACAATGAACATTG--AGACCGATCCCACCCGCACTTTTGGAGATAAGGGCA 2084 Query 80251 CATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAA 80310 || |||| | ||| || || |||||||| || || ||||| |||| | | | ||| Sbjct 2085 CACTGTTTGAGCGTGTCGTATATGCCCTCAATACTGTCATCCTTCATCGTGACCAAAAAG 2144 Query 80311 CAGCTAGACATTTG 80324 ||||||||||| || Sbjct 2145 CAGCTAGACATCTG 2158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717998632169240