Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq4589 228 8e-55 >seq4589 Length=3505 Score = 228 bits (252), Expect = 8e-55 Identities = 514/767 (67%), Gaps = 13/767 (2%) Strand=Plus/Plus Query 13706 ATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTAC 13765 |||||||| |||| || || ||| |||||| ||||||||| || || || | || Sbjct 2216 ATCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGATAAGATCGAC 2275 Query 13766 AGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGT 13825 ||| | || || | ||||| |||||| || ||||| | ||||| || Sbjct 2276 AGGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCATAAT----GT 2331 Query 13826 AATAATCTCATTA-GAAGGAGGATATTTTAGA---TGTTTAAAAATTAAACACGCAAAAT 13881 ||| ||| || | | ||| | || | | || || ||||||| ||||||||| | Sbjct 2332 CATACACTCTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACGCAAAGT 2391 Query 13882 CACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCA 13941 | |||||||| ||||| | ||| || || ||||| || || | || ||||| | Sbjct 2392 CGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGA 2451 Query 13942 ATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAA 14001 || || || || | |||||| || | |||||| || ||||| ||||| | ||||||| Sbjct 2452 GACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAA 2511 Query 14002 CTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTC 14061 ||||| || || | | || || | ||||||| | || |||| ||||| || Sbjct 2512 TAGCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAA 2571 Query 14062 TAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATT 14121 ||||| || | || || | | || |||| ||| || ||||||||| | | Sbjct 2572 GTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAAT 2631 Query 14122 CCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTG 14179 | |||| | | ||||| || ||||||| || || | |||||||||||| || Sbjct 2632 CACGCTCTGCCGGGTCCTTGACAT--ATGTATCGATCAGAAGAGAATACATTTCAGAATG 2689 Query 14180 TATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC 14239 ||||| || | || | || | |||||||| || | ||| || | ||| ||||| Sbjct 2690 AATGTTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTC 2749 Query 14240 CGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC 14299 |||| | || |||||||| ||||| || |||||||| |||||||| || || Sbjct 2750 GTTACAAAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGC 2809 Query 14300 CAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATC 14359 || | | |||||||| | | || ||| ||||| |||| |||||||| | ||| Sbjct 2810 CAGAACATACGAAATAAAGTGTCGTTCACCATCATTGAGATTTTCCCAATCGGTAAGATC 2869 Query 14360 CTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTAC 14419 ||| | | ||| || || ||||| ||||||||| |||||||||||| ||||| | | Sbjct 2870 CTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTC 2929 Query 14420 CCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TCGAAGAT 14465 ||| || || | |||| ||| || | || ||||||| |||| ||| Sbjct 2930 CCAAATGTCATGATATTGTATTGGCATCACGACAAATCTTCGAGGAT 2976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479547556309400