Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq4589 188 7e-43 >seq4589 Length=3505 Score = 188 bits (208), Expect = 7e-43 Identities = 406/605 (67%), Gaps = 4/605 (1%) Strand=Plus/Plus Query 13645 TGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCG 13704 || || ||||||| ||||||||| || |||||||| ||||| | ||| || || ||| Sbjct 2367 TGCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCG 2426 Query 13705 TTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764 || || || | || ||||| | || || || || | |||||| || | ||| || Sbjct 2427 TTACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAAC 2486 Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 || ||||| ||||| | ||||||| ||||| || || | | || || | ||||| Sbjct 2487 GAACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGAT 2546 Query 13825 GCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 || | || || | ||||| || ||||| || | || || | | || Sbjct 2547 GCCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGC 2606 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 13942 |||| || || || |||||| || |||| | | ||||| || ||||||| | Sbjct 2607 GTTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACAT--ATGTATCGA 2664 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | || | |||||||||||| || ||||| || | || | || | |||||||||| Sbjct 2665 TCAGAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAAC 2724 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | | ||| || | ||| || || |||| | | || ||||| ||||| | Sbjct 2725 AACGAGCCTCAGGAACTTGAACTTCGTTACAAAAATTCAAGGTTAAATTTTCGTTAACGA 2784 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 | |||||||| |||||||| || |||| | | |||||||| | | || ||| | Sbjct 2785 TGCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCAT 2844 Query 14123 TGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAAC 14182 |||| |||| |||||||| | |||||| | | ||| || || ||||| ||||||||| Sbjct 2845 TGAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAG 2904 Query 14183 TAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAA 14242 |||||||||||| ||||| | |||| || || | |||| ||| || | || |||| Sbjct 2905 AAGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAA 2964 Query 14243 ATCTT 14247 ||||| Sbjct 2965 ATCTT 2969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478408784805240