Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4589 248 1e-60 seq4951 123 3e-23 >seq4589 Length=3505 Score = 248 bits (274), Expect = 1e-60 Identities = 509/750 (68%), Gaps = 15/750 (2%) Strand=Plus/Plus Query 41935 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 41994 ||||||||| || ||||| | || || | || | || || ||||| ||| || Sbjct 2252 ACAATTCATGCCGATAAGATCGACAGGTAAGGCATCTGTGAGGAATTCACATTCTATGCT 2311 Query 41995 GACCGCGTCTGTTATAATAGATCTTAC--TGTTTCTTCACTCGGTGGAT--ACAATAAAT 42050 ||| || || || ||||| || ||| | ||||| | | ||| || ||||| | Sbjct 2312 GACGGCCTCCGTCATAATG--TCATACACTCTTTCTGCTGTAGGTTTATTGACAATG--T 2367 Query 42051 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGT 42110 | || || || | ||| || || ||| ||| || || ||||| | ||| || | |||| Sbjct 2368 GCTTGAAAATTAGACACGCAAAGTCGGTGTGAAGGCCTTCATCGCGACTGATCAGCTCGT 2427 Query 42111 TGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATG 42170 | || || || || ||||| || |||||||| || |||||||| ||||| ||||| | Sbjct 2428 TACTGAAGGTAAGACCAGGCATGAGACCACGCTTCTTGAGCCAAAAAATAGAAGCAAACG 2487 Query 42171 ATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG 42230 | || || ||||| | || || | || || || || | | | ||| | || | Sbjct 2488 AACCGGAGAAGAAAACACCCTCAATAGCAGCGAAAGCCACCACACGCTCAGCGTACGATG 2547 Query 42231 CACTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCG 42287 | || | || |||||||| | |||||||| |||||||| || || |||| || Sbjct 2548 CCCTCTTATTCGCGATCCACTTAAGTGCCCAATCCGCCTTCTTAGCGACGCATGGCAGCG 2607 Query 42288 TTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCA 42347 ||| ||||| ||||| | | | | || || || |||||||||||||||| Sbjct 2608 TTTGAATGGCGTTAAATAAAAAATCACGCTCTGCCGGGTCCTTGACATATGTATCGATCA 2667 Query 42348 AAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATC 42407 |||| ||||||||| ||||||||||| |||| ||||| || | ||| || ||||| | Sbjct 2668 GAAGAGAATACATTTCAGAATGAATGTTCTCAACGGCCACTTGCATTCCATAAAAACAAC 2727 Query 42408 TGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCA--GCTAAATTTTCGTTCACTAT 42465 ||||| | ||| || ||||| ||||||| |||| | |||||||||||| || || Sbjct 2728 GAGCCTCAGGAACTTGAACTTCGTTACAAAA--ATTCAAGGTTAAATTTTCGTTAACGAT 2785 Query 42466 TCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGT 42525 || ||||| |||||||| || |||| |||| ||||| | | ||| | | Sbjct 2786 GCCATCACTCGCTGCAAAGAAGGCCAGAACATACGAAATAAAGTGTCGTTCACCATCATT 2845 Query 42526 TAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGA 42585 | || | |||||| | | ||| || | || ||| || || || ||||||||||| || Sbjct 2846 GAGATTTTCCCAATCGGTAAGATCCTTCGCTAAATCAACCTCCTCAACCGTCCAAAAAGA 2905 Query 42586 TGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || | || || ||||| | | ||| || ||||||||||| ||||| | | ||||| Sbjct 2906 AGCGACAGCTTTCTTATAGAACTCCCAAATGTCATGATATTGTATTGGCATCACGACAAA 2965 Query 42646 TCTATTTGGATTTGGTGCAAGGATCGGTTC 42675 ||| ||||| || |||| | ||||| Sbjct 2966 TCTTCGAGGATTGGGAACAAGTAAAGGTTC 2995 >seq4951 Length=3275 Score = 123 bits (136), Expect = 3e-23 Identities = 325/494 (66%), Gaps = 4/494 (1%) Strand=Plus/Plus Query 71916 TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCC 71975 |||| |||||| | | || | | ||||||| || || ||||| || | | || Sbjct 1667 TTCTGATTCGTACTTCGAGTAAAGTTGTTCGAAATCCTCCCCCCAGCAATCAGCAAGACC 1726 Query 71976 AGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAA 72035 ||| ||||||| ||| ||| || | ||| ||| || | || | ||||| || Sbjct 1727 AGGGCATTCATGGGGATCCATAAAGGTCCATGAACCACCAGTTTCAACCCTCTTCATGAA 1786 Query 72036 GAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGT 72095 ||||| || |||||||| || | || |||||||| | | | |||||| || || Sbjct 1787 CAGATCGGGGATCCAAAGCGCGAGGAAAAGATCTCTTGCACGAATCTCCTCAGCGCCAGT 1846 Query 72096 ATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGC 72155 ||||| | || | || || | ||| | |||||| || || | ||| | || Sbjct 1847 GTTCTTCCGCAATTCCACAAATTGCAGTACATCTGGATGCCATGGCTCAAGGTAGACAGC 1906 Query 72156 CATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 72215 | | || || |||||||| || || || |||| || | ||| ||| | || | || Sbjct 1907 GAAGGCGCCAGGTCGTTTGTTCCCACCTTGGTCTACATAACGAGCAGTGCTGTTGAAGAC 1966 Query 72216 TCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACT 72275 || || ||| || | || |||||| || | |||||||| |||| ||| | | || | Sbjct 1967 TCGCAGCATCGGTACAAGACCATTCGACTCCCCATTGGTGCCGGCGATGAACGTGCCCTT 2026 Query 72276 GGCACGAATAT--TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCG 72333 |||||| || ||||| |||| || || || || |||| ||||| | || Sbjct 2027 ACTCCGAATACAATGAACATTGA--GACCGATCCCACCCGCACTTTTGGAGATAAGGGCA 2084 Query 72334 CATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAA 72393 || |||| | ||| || || |||||||| ||||| |||||| |||| | | | ||| Sbjct 2085 CACTGTTTGAGCGTGTCGTATATGCCCTCAATACTGTCATCCTTCATCGTGACCAAAAAG 2144 Query 72394 CAGCTAGACATTTG 72407 ||||||||||| || Sbjct 2145 CAGCTAGACATCTG 2158 Score = 116 bits (128), Expect = 5e-21 Identities = 178/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 72301 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCC 72360 || || || || || |||| ||||| | || || |||| | ||| || || |||||| Sbjct 2188 CCGATCCCACCCGCACTTTTGGAGATAAGGGCACACTGTTTGAGCGTGTCGTATATGCCC 2247 Query 72361 TCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTT 72420 || ||||| |||||| |||| | | | ||| ||||||||||| || | | || Sbjct 2248 TCGATACTGTCATCCTTCATCGTGACCAAAAAGCAGCTAGACATCTGTGCATTAGGCGTC 2307 Query 72421 CCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTAC 72480 || || ||||| | || || || || || | ||||| ||| |||||| |||||||||| Sbjct 2308 CCAGCGTTAAAGAGCGTTGGTGAGGCATGAATCAACCACTTTCCAGACATTAGATTGTAC 2367 Query 72481 GTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATA 72540 |||||||| || | || | || || || |||| || ||| ||||| ||||| Sbjct 2368 GTCTCAATGGCAGCATCCACGTCTTCGCCGTGAATACCTATCGAGACCCGCATAAACATG 2427 Query 72541 TGCTGAGGTCTTTC 72554 | ||||||||| || Sbjct 2428 TACTGAGGTCTCTC 2441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670886759379160