Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq210 105 7e-18
>seq210
Length=64943
Score = 105 bits (116), Expect = 7e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 142957 GCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCT 143016
||| ||||| ||||||| || ||||||| || || || ||||| |||||||| ||
Sbjct 42399 GCCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGA 42340
Query 143017 CATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076
|| |||| ||| || | |||||||||||| |||| |||||||| || || || ||
Sbjct 42339 CAGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGG 42280
Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136
||||| || ||||| ||| || || | | || | || || | || || ||
Sbjct 42279 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220
Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| | || | ||||||||| || | ||||| ||||| ||||||||
Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 142976 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 143035
|| ||||||| || || || |||||||| ||||| ||| || |||| |||||
Sbjct 39690 ACCAAATGAAGAGTCGACTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATCTTCC 39631
Query 143036 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 143095
| || ||||| ||| | |||| ||| ||||| || || || ||||| || |||||
Sbjct 39630 AACTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGG 39571
Query 143096 ATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTCTTG 143155
||||| || | | || | || ||| | || || || || | || | |||||||
Sbjct 39570 ATTTTCGCCTTCACATTCTCTATCGAGTCACTTGGCTCCACCTCCAAGGTAATCGTCTTG 39511
Query 143156 CCGGTCAATGTTTTTACGAATATTTGCAT 143184
|| |||| || || || |||||||||||
Sbjct 39510 CCAGTCAGCGTCTTCACAAATATTTGCAT 39482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506823692871120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |