Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 179 5e-40
seq3457 87.8 3e-12
>seq4589
Length=3505
Score = 179 bits (198), Expect = 5e-40
Identities = 505/761 (66%), Gaps = 27/761 (4%)
Strand=Plus/Minus
Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069
||||||||||||||||| | || || || ||| || || ||||||||||| || |||
Sbjct 2944 TATCATGACATTTGGGAGTTCTATAAGAAAGCTGTCGCTTCTTTTTGGACGGTTGAGGAG 2885
Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129
|| ||| | | ||||| || ||||||||| | || | | ||| ||| ||| |
Sbjct 2884 GTTGATTTAGCGAAGGATCTTACCGATTGGGAAAATC---TCAATGATGGTGAACGACAC 2828
Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTG 125189
||||| ||| | || ||||||||||||| | ||||| ||||| ||||| ||| |
Sbjct 2827 TTTATTTCGTATGTTCTGGCCTTCTTTGCAGCGAGTGATGGCATCGTTAACGAAAATTTA 2768
Query 125190 ---TTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGT-GCTTTTACGGATT 125245
|||| | || | | | |||| | |||| |||| |||| | ||||| ||| |
Sbjct 2767 ACCTTGA-ATTTTTGTAACGA-AGTTCAAG-TTCCTGAGGC-TCGTTGTTTTTATGGAAT 2712
Query 125246 CCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
||| | |||||||| | || || |||||||| ||| ||||| || | || |
Sbjct 2711 GCAAGTGGCCGTTGAGAACATTCATTCTGAAATGTATTCTCTTCTGATCGATACATATGT 2652
Query 125306 TCGCGATCCGCAA---CGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTAT 125362
|| ||| | ||| | | | |||||||| || | ||| |||| | |
Sbjct 2651 CAAGGACCCGGCAGAGCGTGATT---TTTTATTTAACGCCATTCAAACGCTGCCATGCGT 2595
Query 125363 ACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGA 125422
||| ||||| | |||| || |||||||| | | | | | |||||||| ||
Sbjct 2594 CGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATAAGAGGGCATCGTACGCTGA 2535
Query 125423 CAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCAT 125482
| ||||||| ||||| || | ||||| | ||||| || ||| ||||| | ||
Sbjct 2534 GCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTTCTCCGGTTCGTTTGCTTCTAT 2475
Query 125483 CTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATC 125542
||||||||||||||||| || |||||||| || || || |||||||||| | ||
Sbjct 2474 TTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTTCAGTAACGAGCTGATCAG 2415
Query 125543 TCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCC 125602
||| || || ||||| ||| |||||||| |||| | || ||| | | |||
Sbjct 2414 TCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCTAATTTT---CAAGCA-CATTGTC- 2360
Query 125603 CGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662
| | | | |||| |||| || ||||| | || || ||||| || |||||
Sbjct 2359 --AATAAACCTACAGC--AGAAAGAGTGTATGACATTATGACGGAGGCCGTCAGCATAGA 2304
Query 125663 ACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAAT 125722
| || || || || || || |||| ||| | || |||||||| || |||||
Sbjct 2303 ATGTGAATTCCTCACAGATGCCTTACCTGTCGATCTTATCGGCATGAATTGTCGCCTAAT 2244
Query 125723 GTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACG 125763
||| |||||||| |||||| || ||||| || || ||||
Sbjct 2243 GTGTCAGTACATAAGGTTTGTTGCTGATCGGCTGCT-TACG 2204
>seq3457
Length=4417
Score = 87.8 bits (96), Expect = 3e-12
Identities = 132/184 (72%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 134236 ATACGCTCACAAATCAGTTGTGCGATGCGATCACCC--TTTGACACTACAAAGTCGTCAT 134293
||||||||||| || ||||| |||||||||||||| | |||| || ||| || || |
Sbjct 2847 ATACGCTCACATATGAGTTGAGCGATGCGATCACCACGTCTGACG-TAAAAA-TCTTCGT 2790
Query 134294 CGGAATGGTTAAAGAGGACCACTCCAATGTTTCCAGTATAGTCGCGGTCCACGACACCGG 134353
|| | ||| ||||| ||||| ||| || || ||||| | || || || || |
Sbjct 2789 CGCCAAAGTTGAAGAGAACCACCATAATATTACCGCGGTAGTCTGGATCAACAACTCCAG 2730
Query 134354 CTCCGACGTCGATTCCGTACTTGGCTGCCAGTTTGGATCGCGGAGCAATCCTACCGTAGC 134413
| || ||||||||||||| ||| |||||| | || ||||| |||| ||| ||||
Sbjct 2729 CACCTACGTCGATTCCGTGCTTCAAAGCCAGTCCGCTACGGGGAGCTATCCGACCATAGC 2670
Query 134414 AACC 134417
| ||
Sbjct 2669 ATCC 2666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740780459845160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |