Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq2251 109 5e-19
seq210 98.7 8e-16
seq25 87.8 1e-12
>seq2251
Length=6394
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 18813 TTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCG 18872
|||||||||| | || || || | || | ||| || ||||||||||| ||||| || |
Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173
Query 18873 CCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGG 18932
| ||| | ||||||| ||| || || ||| | ||||||| ||||| || |
Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113
Query 18933 GCACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCG 18992
| | |||||| ||||| ||||||| ||| || | | | || |||| ||||||
Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAA 1053
Query 18993 TTTCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTA 19045
|| | || |||||||| || || | ||||| ||||||||||||||||||
Sbjct 1052 CCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTTA 1000
>seq210
Length=64943
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874
|| |||||||| | | ||||| || | || |||||||||||||| ||||| |||| |
Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339
Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934
| || ||||||||| ||||||||| ||| | || || | || || ||| ||
Sbjct 42338 AGAGTGCGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGGA 42279
Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994
| |||||| ||||| ||| ||| || || | | | | ||| | ||||||
Sbjct 42278 ATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCACC 42219
Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| | |||||| || || || || | ||||||||| || ||||||||
Sbjct 42218 TCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCAT 42172
>seq25
Length=187393
Score = 87.8 bits (96), Expect = 1e-12
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Plus
Query 21138 GACGTTGCCCAGATCGCCGACGTGCCGCTCTGCGGCGTCGGGAGCGCCGTGATTTTGGTG 21197
|||||| || ||||| || || |||||||| || || || ||||| || || |||| |
Sbjct 97811 GACGTTACCAAGATCCCCAACATGCCGCTCAGCTGCATCAGGAGCACCATGGTTTTTGC- 97869
Query 21198 CGTAGGG-TTAAAGTGCTCGCCGGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAACTCGT 21256
||| ||| |||||||| | ||||| || || ||||| | | ||||| || || ||||
Sbjct 97870 CGTGGGGGTTAAAGTGAGCACCGGCAGATGTACAGCCATCTGTTGTGTCTCCAAATTCGT 97929
Query 21257 GAACGTGAAAGCCGTGC 21273
| || ||||| ||||||
Sbjct 97930 GCACATGAAATCCGTGC 97946
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414420762032854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |