Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq2251 113 4e-20 seq210 87.8 2e-12 seq25 87.8 2e-12 seq10174 84.2 2e-11 >seq2251 Length=6394 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||||||||||| ||||| || | ||| || || ||||| ||||| |||||||| ||| Sbjct 1232 TTCCTCCTCGTAGTCTCAAAACAAGATGGAGCGTCGATTCCTTTTGAATGTTGTAGTCGG 1173 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 | |||| ||| ||||| || ||||| ||| | ||||| | || || || | Sbjct 1172 AGAGAGTTCGCCCATCCTCCAACTGCTTGCCGGCAAAGATAAGTCGTTGCTGGTCTGGTG 1113 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | ||| || ||||| |||||| ||| || | ||| ||| |||| ||| || Sbjct 1112 GTATGCCCTCCTTGTCTTGAATTTTCGCTTTGACGTTCTCAATAGAGTCGCTAGGCTCAA 1053 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || | || |||||||| || || | ||||| ||||||||||||||||| Sbjct 1052 CCTCAAGAGTGATGGTTTTCCCAGTAAGGGTTTTAACAAAAATTTGCATTTT 1001 >seq210 Length=64943 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 19999 CACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTC 20058 ||||||||| | || || |||||||| |||||||| || || ||| | |||||| Sbjct 39463 CACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATCTTC 39404 Query 20059 CAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGC 20118 ||| || || || ||| | || | | |||||| || || | ||| || ||||| Sbjct 39403 CAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTCTTG 39344 Query 20119 AATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTT 20178 || || ||||| | ||| || || | || ||| |||| ||||| || || Sbjct 39343 GATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGTCTT 39284 Query 20179 GCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAAC 20216 ||| ||||||||||| ||||| |||||||| | |||| Sbjct 39283 GCCCGTCAACGTTTTCACAAAGATTTGCATCCTGAAAC 39246 >seq25 Length=187393 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/139 (74%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 22347 GCACGGTTTTCACGTGCACGAATTTGGCGACACAAGCAATGGGTGCACGTCGGCAGGCGA 22406 |||||| ||||| |||||||||||||| ||||||| |||| || || || || || | Sbjct 97946 GCACGGATTTCATGTGCACGAATTTGGAGACACAACAGATGGCTGTACATCTGCCGGTGC 97887 Query 22407 GCACTTTAACCCTACGCACCGGCAA----CATGGCGCGCCTGACGCTGCGGAGCGTCACG 22462 ||||||||||| | |||||| ||||| || ||||| || || ||||| || | Sbjct 97886 TCACTTTAACCC----CCACGGCAAAAACCATGGTGCTCCTGATGCAGCTGAGCGGCATG 97831 Query 22463 TCGGCGATTTGGGCAACGT 22481 | || ||| | || ||||| Sbjct 97830 TTGGGGATCTTGGTAACGT 97812 >seq10174 Length=1708 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 20053 ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTT 20112 |||||| ||||| ||||| ||| ||||||| | ||| || || || | || || || Sbjct 1112 ATCTTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTT 1171 Query 20113 GTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAAT 20172 ||| ||||||| ||||| | ||| ||| || |||||| || | ||| || Sbjct 1172 GTCTTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGAT 1231 Query 20173 GGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| |||||||| | |||||||||||||| ||||| Sbjct 1232 GGTCTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419433323081571