Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09- 25] 30,091 sequences; 103,664,560 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4589 206 2e-48 >seq4589 Length=3505 Score = 206 bits (228), Expect = 2e-48 Identities = 507/762 (67%), Gaps = 10/762 (1%) Strand=Plus/Plus Query 12986 TCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACA 13045 |||||||||||| ||||||||| ||||| ||| ||||| || || | | ||| Sbjct 2217 TCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGATAAGATCGACA 2276 Query 13046 GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTT 13105 || | || ||||| | || | |||||| || || || | | ||||| | Sbjct 2277 GGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCATAATGTCA--T 2334 Query 13106 ATTACGTTCTCTAATGGAGGATT--TGATAGA-TGCTTAAACATCATACATGCAAAATCA 13162 | || | ||| || ||| || ||| | ||||| || || | ||| ||||| || Sbjct 2335 AC-ACTCTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACGCAAAGTCG 2393 Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222 ||| | |||||||| | ||| || |||||||| || || ||||| ||||| || Sbjct 2394 GTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGA 2453 Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACT 13282 || || || || | |||||| |||| |||||||||||| || || || | || |||| Sbjct 2454 CCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATA 2513 Query 13283 GCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTG 13342 || || || || | || | ||| | |||| | ||| || | |||||||| Sbjct 2514 GCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGT 2573 Query 13343 GCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttt 13402 ||||| | || || | ||||| || ||| || |||||||||||| ||| Sbjct 2574 GCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCA 2633 Query 13403 ttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATA 13462 || ||| | ||| ||||| |||| | ||||||||| |||||||| Sbjct 2634 CGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATG 2693 Query 13463 TTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAG 13522 || || | || | ||| | ||||||||||| | |||||| | || ||||||||| Sbjct 2694 TTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTA 2753 Query 13523 TAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGT 13582 |||| | | ||| ||||||||||| || || ||||| || ||||| || || || Sbjct 2754 CAAAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGA 2813 Query 13583 ATGTGCTTAATAAAttttttttCGTTTTC--TGACAACTTTAACCAATCTGGAAAATCTT 13640 | | | |||||| | | ||| || ||| | ||| |||||| | || ||| | Sbjct 2814 ACATACGAAATAAAGTGTCGTTCACCATCATTGAGA--TTTTCCCAATCGGTAAGATCCT 2871 Query 13641 TTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCC 13700 | | |||||| ||||||||||| |||||||||||||| ||||| |||||||| | | || Sbjct 2872 TCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTCCC 2931 Query 13701 ATATATCCTTATAAACAATGGGAAACACAACGTATCTTCCAG 13742 | || || | ||| || || | ||| || |||||| || Sbjct 2932 AAATGTCATGATATTGTATTGGCATCACGACAAATCTTCGAG 2973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430824344073582