Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 206 2e-48
>seq4589
Length=3505
Score = 206 bits (228), Expect = 2e-48
Identities = 507/762 (67%), Gaps = 10/762 (1%)
Strand=Plus/Plus
Query 12986 TCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTACA 13045
|||||||||||| ||||||||| ||||| ||| ||||| || || | | |||
Sbjct 2217 TCAGCAACAAACCTTATGTACTGACACATTAGGCGACAATTCATGCCGATAAGATCGACA 2276
Query 13046 GGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTATGTCTCTT 13105
|| | || ||||| | || | |||||| || || || | | ||||| |
Sbjct 2277 GGTAAGGCATCTGTGAGGAATTCACATTCTATGCTGACGGCCTCCGTCATAATGTCA--T 2334
Query 13106 ATTACGTTCTCTAATGGAGGATT--TGATAGA-TGCTTAAACATCATACATGCAAAATCA 13162
| || | ||| || ||| || ||| | ||||| || || | ||| ||||| ||
Sbjct 2335 AC-ACTCTTTCTGCTGTAGGTTTATTGACAATGTGCTTGAAAATTAGACACGCAAAGTCG 2393
Query 13163 CAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGC 13222
||| | |||||||| | ||| || |||||||| || || ||||| ||||| ||
Sbjct 2394 GTGTGAAGGCCTTCATCGCGACTGATCAGCTCGTTACTGAAGGTAAGACCAGGCATGAGA 2453
Query 13223 CCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACT 13282
|| || || || | |||||| |||| |||||||||||| || || || | || ||||
Sbjct 2454 CCACGCTTCTTGAGCCAAAAAATAGAAGCAAACGAACCGGAGAAGAAAACACCCTCAATA 2513
Query 13283 GCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCACTTTCTG 13342
|| || || || | || | ||| | |||| | ||| || | ||||||||
Sbjct 2514 GCAGCGAAAGCCACCACACGCTCAGCGTACGATGCCCTCTTATTCGCGATCCACTTAAGT 2573
Query 13343 GCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAATAAttt 13402
||||| | || || | ||||| || ||| || |||||||||||| |||
Sbjct 2574 GCCCAATCCGCCTTCTTAGCGACGCATGGCAGCGTTTGAATGGCGTTAAATAAAAAATCA 2633
Query 13403 ttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATA 13462
|| ||| | ||| ||||| |||| | ||||||||| ||||||||
Sbjct 2634 CGCTCTGCCGGGTCCTTGACATATGTATCGATCAGAAGAGAATACATTTCAGAATGAATG 2693
Query 13463 TTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAG 13522
|| || | || | ||| | ||||||||||| | |||||| | || |||||||||
Sbjct 2694 TTCTCAACGGCCACTTGCATTCCATAAAAACAACGAGCCTCAGGAACTTGAACTTCGTTA 2753
Query 13523 TAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGT 13582
|||| | | ||| ||||||||||| || || ||||| || ||||| || || ||
Sbjct 2754 CAAAAATTCAAGGTTAAATTTTCGTTAACGATGCCATCACTCGCTGCAAAGAAGGCCAGA 2813
Query 13583 ATGTGCTTAATAAAttttttttCGTTTTC--TGACAACTTTAACCAATCTGGAAAATCTT 13640
| | | |||||| | | ||| || ||| | ||| |||||| | || ||| |
Sbjct 2814 ACATACGAAATAAAGTGTCGTTCACCATCATTGAGA--TTTTCCCAATCGGTAAGATCCT 2871
Query 13641 TTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCC 13700
| | |||||| ||||||||||| |||||||||||||| ||||| |||||||| | | ||
Sbjct 2872 TCGCTAAATCAACCTCCTCAACCGTCCAAAAAGAAGCGACAGCTTTCTTATAGAACTCCC 2931
Query 13701 ATATATCCTTATAAACAATGGGAAACACAACGTATCTTCCAG 13742
| || || | ||| || || | ||| || |||||| ||
Sbjct 2932 AAATGTCATGATATTGTATTGGCATCACGACAAATCTTCGAG 2973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430824344073582
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |