Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq4589 158 3e-33
seq210 140 7e-28
seq10174 132 1e-25
>seq4589
Length=3505
Score = 158 bits (174), Expect = 3e-33
Identities = 475/723 (66%), Gaps = 18/723 (2%)
Strand=Plus/Minus
Query 268700 AGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAACAGGCCGTT 268759
|||||||| | | |||||||| || ||| || ||| | | || || | || ||
Sbjct 2968 AGATTTGTCGTGATGCCAATACAATATCATGACATTTGGGAGTTCTATAAGAAAGCTGTC 2909
Query 268760 GCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGGAAAAAT 268819
|||||||||||||| || || || || ||| | | | || | | |||||| |||||
Sbjct 2908 GCTTCTTTTTGGACGGTTGAGGAGGTTGATTTAGCGAAGGATCTTACCGATTGGGAAAAT 2849
Query 268820 TTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGTTTTTTGCAGTTAGTGAT 268879
| || | ||| || ||||| || ||| |||| || || ||||||| ||||||
Sbjct 2848 CTCAATGATGGTGAACGACACTTTATTTCGTATGTTCTGGCCTTCTTTGCAGCGAGTGAT 2789
Query 268880 GGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCC 268939
|| ||||||||||||||| || ||| || ||| | || || || ||||||| ||
Sbjct 2788 GGCATCGTTAACGAAAATTTAACCTTGAATTTTTGTAACGAAGTTCAAGTTCCTGAGGCT 2729
Query 268940 AGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGATGTACAGTCTA 268999
| |||||||| ||| | || | || | || || |||||||| || ||||| |||
Sbjct 2728 CGTTGTTTTTATGGAATGCAAGTGGCCGTTGAGAACATTCATTCTGAAATGTATTCTCTT 2669
Query 269000 TTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTCTT----CTAT 269055
| || ||||| ||| | | | || | | || || | ||| || | ||
Sbjct 2668 CTGATCGATACATATGTCAAGG---ACCCGGCAGAG-CGTGATTTTTTATTTAACGCCAT 2613
Query 269056 GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTGAAATGGAT---AAACGA 269112
||| || || || || || | || ||||| || || ||||| || |
Sbjct 2612 TCAAACGCTGCCATGCGTCGCTAAGAAGGCGGATTGGGCACTTAAGTGGATCGCGAATAA 2553
Query 269113 TAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTC 269172
|| || | |||| || | | || ||||| || ||| | || ||| | ||||| ||
Sbjct 2552 GAGGGCATCGTACGCTGAGCGTGTGGTGGCTTTCGCTGCTATTGAGGGTGTTTTCTTCTC 2493
Query 269173 GGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTT 269232
|| || ||||| |||| |||||| | ||||| | || || ||||| || | || ||
Sbjct 2492 CGGTTCGTTTGCTTCTATTTTTTGGCTCAAGAAGCGTGGTCTCATGCCTGGTCTTACCTT 2433
Query 269233 CTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292
| |||||| |||| || | || ||||| | ||| |||||| || ||| || |||
Sbjct 2432 CAGTAACGAGCTGATCAGTCGCGATGAAGGCCTTCACACCGACTTTGCGTGTCTA--ATT 2375
Query 269293 TACTAATTATCTT-TCACACAAACCTTCTCAAGATAGAGTATACGAAATTATAGATTCA- 269350
| | || | || ||| | |||||| | ||| ||||| || || ||||| || |
Sbjct 2374 TTC-AAGCACATTGTCA-ATAAACCTACAGCAGAAAGAGTGTATGACATTAT-GACGGAG 2318
Query 269351 GCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCTATCGATCTTATCGGTATG 269410
|| || ||||| ||||| || || || || || || ||||||||||||| |||
Sbjct 2317 GCCGTCAGCATAGAATGTGAATTCCTCACAGATGCCTTACCTGTCGATCTTATCGGCATG 2258
Query 269411 AAT 269413
|||
Sbjct 2257 AAT 2255
>seq210
Length=64943
Score = 140 bits (154), Expect = 7e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || || ||||| || ||||| || ||||| | |||||| || | ||||| |||
Sbjct 42368 GTTGACTCCTTTTGAATGTTGTAGTCCGACAGAGTGCGACCGTCCTCCAACTGTTTACCA 42309
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||||| || || || || || || || ||||||||||| || ||
Sbjct 42308 GCAAAGATGAGACGTTGTTGGTCCGGTGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTC 42249
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| |||| | ||| || || || ||||| || ||||| ||||| |||||||| |||
Sbjct 42248 ACATTCTCTATCGAATCACTCGGCTCCACCTCCAGGGTAATCGTCTTGCCAGTAAGAGTT 42189
Query 104543 TTTACAAATATCTGCAT 104559
|| || || || |||||
Sbjct 42188 TTGACGAAGATTTGCAT 42172
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || || || || ||||| || |||||||| ||||| | ||| ||
Sbjct 30386 AAGCACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTGCGACCATC 30445
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || || || ||||| || | | ||| || || || || || || || || ||
Sbjct 30446 TTCCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTC 30505
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||||| || || ||||| |||| | || || || || ||||| | ||||||||
Sbjct 30506 TTGAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGT 30565
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || ||||| || || |||||||| |||||
Sbjct 30566 CTTCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| | || ||||| || || ||||| ||||| || ||||| | ||| ||
Sbjct 30842 AAGCACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTGCGACCATC 30901
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || || || || || |||| | ||| ||||| || || || || || || ||
Sbjct 30902 TTCCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTC 30961
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||||| || |||||||| || | || ||| || || || || || || ||||||||
Sbjct 30962 TTGAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGT 31021
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || || || ||||| || |||||
Sbjct 31022 CTTCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || | ||| || || || ||||| ||||| || |||||||| ||||| | ||| ||
Sbjct 39466 AAGCACCAAATGCAAAGTTGACTCTTTTTGAATGTTGTAGTCAGACAGAGTACGACCATC 39407
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| | || ||||| ||||| || | | |||||| || || || || || || || ||
Sbjct 39406 TTCCAACTGCTTTCCTGCAAAGATCAAACGCTGTTGGTCCGGTGGAATGCCCTCCTTGTC 39347
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|| ||||| || || ||||| || | | || || || || ||||| | |||||||||
Sbjct 39346 TTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTTGGCTCCACCTCCAATGTAATAGT 39287
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || | ||||| ||||| || |||||
Sbjct 39286 CTTGCCCGTCAACGTTTTCACAAAGATTTGCAT 39254
Score = 104 bits (114), Expect = 5e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 104378 ATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTC 104437
||||| |||||||| | || | || ||||| | || || || || || |||| | |
Sbjct 40347 ATATTGTAGTCAGACAAGGTGCGTCCATCTTCCAACTGCTTACCGGCGAAGATTAAACGC 40288
Query 104438 TGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTA 104497
|| || || || || || || || || || |||||||| || || ||||| |||| |
Sbjct 40287 TGCTGGTCCGGTGGAATGCCCTCCTTGTCTTGAATCTTCGCCTTCACATTCTCTATCGAG 40228
Query 104498 TCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGC 104557
|| || || || ||||| | ||||||||||| || ||||| || || |||||||| |||
Sbjct 40227 TCACTCGGCTCCACCTCCAAGGTAATAGTCTTCCCCGTAAGCGTCTTCACAAATATTTGC 40168
Query 104558 AT 104559
||
Sbjct 40167 AT 40166
>seq10174
Length=1708
Score = 132 bits (146), Expect = 1e-25
Identities = 157/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || || || ||||||||||| ||||| || | | | || ||
Sbjct 1055 AAGCACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATC 1114
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||||| ||| || ||||||||||| || | ||| || || ||||| || || || || ||
Sbjct 1115 TTCTAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTC 1174
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||| ||||| || ||||| || | | || |||||| ||||| || || || ||
Sbjct 1175 TTGAATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGT 1234
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || || || ||||| ||||| ||||||||
Sbjct 1235 CTTGCCGGTGAGAGTTTTGACAAAAATCTGCAT 1267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1150954488781428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |