Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hydatigera_20taeniaeformis_20[genbank_20GCA_5F000951575.1_202014-09-
25] 30,091 sequences; 103,664,560 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq210 104 2e-17
seq10174 87.8 2e-12
>seq210
Length=64943
Score = 104 bits (114), Expect = 2e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| |||||||| || |||||||| || ||||| || | || | || || | || |
Sbjct 39919 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTG-CGACCATCTT 39861
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
||| |||||||||| || | |||||||||||||||||| ||| | | ||||||||
Sbjct 39860 CCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTT 39801
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| ||| ||| | | | | |||| ||| | | |||| ||| | ||| || || |
Sbjct 39800 GAATCTTCGCCTTCACATTCTCAATGGAATCACTGGGCTCCACCTCCAGTGTAATTGTCT 39741
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || || |||||||| || |||||
Sbjct 39740 TGCCAGTTAGCGTCTTCACAAATATTTGCAT 39710
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| || ||||| | | ||| |||||||| || |||||||||||||||||| || | |
Sbjct 42398 CCACCTCGCAAACGCAGCACCAAATGAAGGGTTGACTCCTTTTGAATGTTGTAGTCCGAC 42339
Query 48560 A-ATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
| | || || ||||||||| ||| ||||| | | || | ||| || || ||| ||
Sbjct 42338 AGAGTG-CGACCGTCCTCCAACTGTTTACCAGCAAAGATGAGACGTTGTTGGTCCGGTGG 42280
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| | ||||||||| ||| ||| ||| | | | |||| | ||| | | ||||
Sbjct 42279 AATGCCCTCCTTGTCCTGAATCTTCGCCTTCACATTCTCTATCGAATCACTCGGCTCCAC 42220
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
||| | || || || || || || |||||||| || || || ||||||
Sbjct 42219 CTCCAGGGTAATCGTCTTGCCAGTAAGAGTTTTGACGAAGATTTGCATC 42171
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| | ||| || || |||||||||||||||||| |||| || | || || | || |
Sbjct 30389 CACAAGATGCAGAGTTGACTCCTTTTGAATGTTGTAGTCAGACAGAGTG-CGACCATCTT 30447
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
||||||||||||| | | || ||||||||||| ||| || | | ||||||||
Sbjct 30448 CCAGCTGCTTACCCGCAAATATCAAACGCTGCTGGTCCGGTGGAATGCCCTCCTTGTCTT 30507
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| ||| ||| | | | |||| | || | | |||| ||| | || || || |
Sbjct 30508 GAATCTTCGCCTTCACATTCTCTATCGAGTCACTCGGCTCCACCTCCAAGGTAATAGTCT 30567
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || || |||||||| || |||||
Sbjct 30568 TCCCCGTAAGCGTCTTCACAAATATTTGCAT 30598
Score = 86.0 bits (94), Expect = 5e-12
Identities = 147/211 (70%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCT 48575
||| |||||||| || |||||||| || ||||| || | || | || || | || |
Sbjct 30845 CACCAAATGAAGGGTCGATTCCTTTTGTATATTGTAGTCGGACAGAGTG-CGACCATCTT 30903
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
||| |||||||||| || | |||||||||||||||||| ||| | | ||||||||
Sbjct 30904 CCAACTGCTTACCGGCGAAGATTAAACGCTGCTGATCCGGCGGGATGCCCTCCTTGTCTT 30963
Query 48636 TAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTT 48695
||| || ||| | | | | |||| ||| | | ||| || | || || || |
Sbjct 30964 GAATCTTAGCCTTTACATTCTCAATGGAATCACTGGGCTCAACTTCCAGAGTAATAGTCT 31023
Query 48696 TACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || || |||||||| || |||||
Sbjct 31024 TCCCCGTTAGCGTCTTCACAAAGATTTGCAT 31054
>seq10174
Length=1708
Score = 87.8 bits (96), Expect = 2e-12
Identities = 146/211 (69%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTC 48576
||| | |||||| || |||||| ||||| ||||| || | ||| ||| | || ||
Sbjct 1058 CACAAGATGAAGCGTTGACTCCTTCTGAATATTGTAGTCGGACAAGGACCGCCCATCTTC 1117
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
| ||||| || | |||| | ||||||||| ||| || | || ||||||||
Sbjct 1118 TAATTGCTTGCCAGCAAAAATAAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCTTG 1177
Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696
|||||| ||| | | | | || | || | || || ||| | || ||||| ||
Sbjct 1178 AATTTTTGCCTTCACATTCTCAATAGAGTCAGAAGGTTCAACCTCAAGGGTGATGGTCTT 1237
Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|||||||||||||| |||||||||||||||
Sbjct 1238 GCCGGTGAGAGTTTTGACAAAAATCTGCATC 1268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421096712836091
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |